Sequence 1: | NP_001286489.1 | Gene: | Nup62 / 36830 | FlyBaseID: | FBgn0034118 | Length: | 394 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_491232.1 | Gene: | npp-11 / 171954 | WormBaseID: | WBGene00003797 | Length: | 805 | Species: | Caenorhabditis elegans |
Alignment Length: | 545 | Identity: | 144/545 - (26%) |
---|---|---|---|
Similarity: | 206/545 - (37%) | Gaps: | 185/545 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 PTTTAAPTGGATSSFSFGLSTGTPAAAPASG---AATTAPATKT--TFSFGTPA---PTAGIGGG 62
Fly 63 DADNSKAQAPPAFGFGLGSGTASAPLTLG------TQAAANPASTTSATATGTSAAPPA------ 115
Fly 116 --FGGFT-----AQPAASVV---PTIATSAPNT------------------AATTTGLLGGSGLG 152
Fly 153 APKTTA-------AASTTLTAAPSAIASTQG-------AAPAPTLSTGGAFANLTTETKTTDSSA 203
Fly 204 VSTASQLS--------------------------------------------------------- 211
Fly 212 ---------------------------YHQLEEHINKWTLEFEEQEKVFTEQATQINAWDKLLIS 249
Fly 250 NNGKIV-------ELNDAVKKVKTDQQVLDQELEFIATQQKELEDSLG-----------PLEKEF 296
Fly 297 VNLPRVDMERSQTYLMVENLDTQLKQMSEDLKEIIDNLNEANK---GQDTTDPIIQIGKILNAHM 358
Fly 359 NSLQWIESQSTNISKKLEDIGKIQD 383 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup62 | NP_001286489.1 | Nsp1_C | 194..300 | CDD:309972 | 32/207 (15%) |
SMC_N | <213..392 | CDD:330553 | 49/192 (26%) | ||
npp-11 | NP_491232.1 | Nucleoporin_FG | 117..218 | CDD:290362 | |
Nucleoporin_FG | 220..328 | CDD:290362 | 28/62 (45%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160165961 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2196 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0002862 | |
OrthoInspector | 1 | 1.000 | - | - | oto19198 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102783 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR12084 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R852 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.770 |