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Protein Alignment CG7997 and Naga

DIOPT Version :9

Sequence 1:	NP_611119.1	Gene:	CG7997 / 36829	FlyBaseID:	FBgn0034117	Length:	417	Species:	Drosophila melanogaster
Sequence 2:	NP_001012120.1	Gene:	Naga / 315165	RGDID:	1306025	Length:	415	Species:	Rattus norvegicus

Alignment Length:	408	Identity:	194/408 - (47%)
Similarity:	269/408 - (65%)	Gaps:	22/408 - (5%)

- Green bases have known domain annotations that are detailed below.

  Fly    12 ILLLQVLQLSMGLDNGLALKPPMGWMSWERFRCITDCKLYPDECISEKLFQRHADLLVSEGYADA 76
            :|||.::...:.|:|||...|||||::||||||..:|:..|..||||:||...||.|..:|:.|.
  Rat     6 VLLLALVAQVLMLENGLLRTPPMGWLAWERFRCNINCEEDPKNCISERLFMEMADRLAQDGWRDL 70

  Fly    77 GYEYVIIDDCWLEKNRDNDTQKLVPDRKRFPNGLNALSDHIHNQGLKFGLYQDYGTNTCAGYPG- 140
            ||.|:.|||||: ..|| .|.:|:||.||||:|:..|:|:.|:.|||.|:|:|.|..||.||||
  Rat    71 GYVYLNIDDCWI-GGRD-ATGRLIPDPKRFPHGIAFLADYAHSLGLKLGIYEDMGKMTCMGYPGT 133

  Fly   141 VIKHMKLDAQTFADWDVDYVKLDGCYANISDMASGYPEFGRLLNETGRPMVYSCSWPAYQEDAGE 205
            .:..::|||.|||:|.||.:||||||:...:.|.|||:....||.||||:.:|||||||:   |.
  Rat   134 TLDKVELDAATFAEWKVDMLKLDGCYSTPKERAEGYPKMAAALNATGRPIAFSCSWPAYE---GG 195

  Fly   206 MP---DYESLKQHCNLWRNWDDIEDSLESLMQIIDYFAKNQDRIQPHGGPGHWNDPDMLLLGNYG 267
            :|   :|..:...||||||:.||:||.:|::.|:|:|.|:||.:||..||||||||||||:||:|
  Rat   196 LPPKVNYTEVAGTCNLWRNYKDIQDSWKSVLSILDWFVKHQDILQPVSGPGHWNDPDMLLIGNFG 260

  Fly   268 LSYDQSKLQMAIWAIMAAPLIMSNDLAAVRPEIKAILQNRAVIAVDQDELGIQGRRVL-SRNQIE 331
            ||:|:|:.|||:|.::||||.||.||..:.|:...||||..:|.::||.||||||.:. |::.||
  Rat   261 LSFDESRAQMALWTVLAAPLFMSTDLRTISPQNIDILQNPLLIKINQDPLGIQGRLIFKSKSHIE 325

  Fly   332 VWKRPITPVTKSGHHSYAVAFVSRRDDGAPYRIPFTVKELGLTNPKG--YNVQDLYDASSKLGVF 394
            |:||.::      ..:.|:.|.|||.| .||.  |....|.|..|||  |..|:::......|:
  Rat   326 VFKRNLS------DDASALVFFSRRTD-MPYH--FHCSLLELNYPKGSVYEGQNVFTGDIISGL- 380

  Fly   395 QSESQFITRVNPNGVTFY 412
            ..|:.|...:||:||..:
  Rat   381 HPETNFTVIINPSGVVMW 398

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.