DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4282 and LOC568955

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_697406.4 Gene:LOC568955 / 568955 -ID:- Length:541 Species:Danio rerio


Alignment Length:611 Identity:135/611 - (22%)
Similarity:191/611 - (31%) Gaps:191/611 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 SFPEIIKLATQEEEGVTE--------------PQELG-GRNFFYPEIKIEEHELDTLPRIEILER 147
            |.|:.:||..  |:||..              .|||| |.|.:               ||...||
Zfish     7 SNPQPVKLGA--EDGVAAGNKESLVLESDFLLGQELGFGENDY---------------RIVGFER 54

  Fly   148 SANTQENQDQLEGAARRLRKRLKAEDGSSVDKDKDED-------GVEETAEPAPPKKRRGRPRKS 205
            .:::                 :.|:.|..|....|||       |:|...|.....:........
Zfish    55 DSDS-----------------VAADMGMPVYGFSDEDCSSYNRLGIESDFEDPRDTESEREEMAP 102

  Fly   206 DAAVAPPQKPKEDIQL---------DLKAEELDEFVDEETDPDFSCLVPSDNSSE--DDGGSDGF 259
            :||.||....::..||         .|:..|.|. .|...:|..    |:||:.|  :...||| 
Zfish   103 EAAFAPYLSCRQCGQLLGDPLSGLYCLQCGETDR-QDRSLEPTH----PADNTLENLNHSRSDG- 161

  Fly   260 DSDSDFELDNGKQEFAVLPKRTVVRPKKYKKRTKPAEPKVRMSRELLEQRKKQQEEYDVIIAKFF 324
                     |..:.|:                .|......|.|..|....|....|         
Zfish   162 ---------NTSKTFS----------------CKLCSFSSRYSNHLKRHMKTHNGE--------- 192

  Fly   325 TSVLPCAICNLLVHNFTEMQRHHRLTHQVDPGYMMC--CGRKFTQRKVLAEHVLVHWNPDHFKCS 387
             ....|..|.........:|||.| ||..:..| .|  |.........|..|..:|.......|:
Zfish   193 -KPYQCPHCVYASAQLVNLQRHVR-THTGEKPY-KCQFCTFACNSLGNLKRHQRMHTQEKELSCA 254

  Fly   388 VCEKSFQNSRHLESHQQVHM-DPAVKLTFSCDLCSKTFLSKTAIDY---------HKLNKHVP-- 440
            .|:....||..|:.|.:.|. |....||....:...|....:..|:         |.|..|:|  
Zfish   255 HCDFRASNSHSLKKHTKSHKEDKTTALTEESVVSDLTLHISSDPDFLQNYDHHHNHHLPSHLPPP 319

  Fly   441 ----------KSE------FKFTCSECNKKFLTERKLKNHMSSMHDPESTI--ICDKCGKQMRTK 487
                      :|:      |.|:|..|.             :.:.|.|:|.  ||.||...|.:|
Zfish   320 ALLHNEGLSGESDPLPELLFPFSCRVCG-------------AVLDDEEATAPQICSKCTLDMLSK 371

  Fly   488 II----------------------LKKHQELMHSDKPRPEPELQQCQICGAWLKGMTGLKQHMKS 530
            ..                      |.:|.:....:||...|   ||....|   ....||:|   
Zfish   372 SSPDKDDKLFPCTSCPFVTQYPNHLARHMKTHSGEKPYKCP---QCSYASA---HFDNLKRH--- 427

  Fly   531 IHVESAGE--HRCHICAKVSPNARALRRHIYHNHECERKFKCTMCEKAFKRPQELKEHTSTHTGE 593
             |....||  ::|.:|.....|...|:|| ...|...:.|:|::|..:..:...||.|...||||
Zfish   428 -HRVHTGEKPYKCRVCDYACGNLANLKRH-ERIHSGSKPFQCSVCSYSCNQSMNLKRHMLRHTGE 490

  Fly   594 VLYTCPNCPMTFFCSANMYKHRQRLH 619
            ..:.|.:|..|.....| ||..|:.|
Zfish   491 KPFKCQHCGYTTGHWDN-YKRHQKKH 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071
FYDLN_acid <191..268 CDD:302856 19/87 (22%)
C2H2 Zn finger 330..351 CDD:275368 6/20 (30%)
C2H2 Zn finger 360..378 CDD:275368 4/19 (21%)
LIM 361..>400 CDD:295319 8/38 (21%)
C2H2 Zn finger 386..406 CDD:275368 6/19 (32%)
zf-C2H2_8 389..465 CDD:292531 20/103 (19%)
C2H2 Zn finger 417..438 CDD:275368 4/29 (14%)
C2H2 Zn finger 448..465 CDD:275368 2/16 (13%)
C2H2 Zn finger 477..498 CDD:275368 7/42 (17%)
C2H2 Zn finger 511..532 CDD:275368 5/20 (25%)
C2H2 Zn finger 541..562 CDD:275368 6/20 (30%)
C2H2 Zn finger 570..590 CDD:275368 5/19 (26%)
C2H2 Zn finger 598..619 CDD:275368 7/20 (35%)
LOC568955XP_697406.4 C2H2 Zn finger 169..189 CDD:275368 5/19 (26%)
zf-H2C2_2 181..206 CDD:290200 5/34 (15%)
COG5048 193..>467 CDD:227381 66/299 (22%)
C2H2 Zn finger 197..217 CDD:275368 6/20 (30%)
zf-H2C2_2 209..234 CDD:290200 9/26 (35%)
C2H2 Zn finger 225..245 CDD:275368 4/19 (21%)
C2H2 Zn finger 253..273 CDD:275368 6/19 (32%)
C2H2 Zn finger 383..403 CDD:275368 2/19 (11%)
zf-H2C2_2 395..420 CDD:290200 8/30 (27%)
C2H2 Zn finger 411..431 CDD:275368 8/29 (28%)
zf-H2C2_2 423..446 CDD:290200 8/26 (31%)
C2H2 Zn finger 439..459 CDD:275368 6/20 (30%)
zf-H2C2_2 451..476 CDD:290200 7/25 (28%)
C2H2 Zn finger 467..487 CDD:275368 5/19 (26%)
zf-H2C2_2 479..502 CDD:290200 9/22 (41%)
C2H2 Zn finger 495..515 CDD:275368 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24403
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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