DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4282 and znf142

DIOPT Version :10

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_690036.3 Gene:znf142 / 561536 ZFINID:ZDB-GENE-080512-2 Length:1535 Species:Danio rerio


Alignment Length:584 Identity:141/584 - (24%)
Similarity:214/584 - (36%) Gaps:135/584 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 EIIKLATQEEEGVTEPQELGGRNFFYPEIKIEEHELDTLPRIEILERSANTQENQDQLEGAA--R 163
            |.:::.....:|..|||     ....|.|.....|.|:||         :|.|     ||.|  |
Zfish   833 ESLEVTDLRLKGSAEPQ-----GSLSPIITDVIDETDSLP---------STSE-----EGQATIR 878

  Fly   164 RLRKRLKAEDGSSVDKDKD---EDGVEETAEPAPPKKRRGRPRKSDAAVAPPQKPKEDIQLDLKA 225
            .:.|..|.:  .||:.:..   |:|...|....|....|........|......||  |.|   |
Zfish   879 TINKLAKVD--VSVNDEVSGYTEEGGRFTCRTCPFSSVRKVTINRHCATCSGSAPK--IYL---A 936

  Fly   226 EELDEFVDEETDPDFSCLVPSDNSSEDDGGSDGFDSDSDFELDNGKQEFAVLPKRTVVRPKKYKK 290
            |...:|..|:...|      ||...||..|::  ||:.|..:|...             |....:
Zfish   937 EMAGQFEQEDHFND------SDQEDEDVDGAN--DSEGDSAVDERS-------------PSSIPR 980

  Fly   291 RTKPAEPKVRMSRELLEQRK-----KQQEEYDVIIAKFFTSVLPCAICNLLVHNFTEMQRHHRLT 350
            .:.|..|.:...:..|...:     ||.|             :.|..|:.:..:...:. ||.|:
Zfish   981 FSCPNCPFLCHQKRALASHEVKGCLKQGE-------------IQCPHCSFVAKSDKSLS-HHILS 1031

  Fly   351 HQVD--------PGYMMC--CGRKFTQRKVLAEHVLV-HWNPDHFKCSVCEKSFQNSRHLESHQQ 404
            |:.|        .|.:.|  |.....|.:.|.:||.| |......:|..|..|......||:|:.
Zfish  1032 HKKDKKATKGKRSGNLQCDLCSFTCKQERCLMQHVAVKHEGVRPHQCRFCSFSTVRRYRLEAHES 1096

  Fly   405 VHMDPAVKLTFSCDLCSKTFLSKTAI-------------------DY----------HKLNKHVP 440
            :|....   ..||:||.:||.:.:.:                   ||          |.|:.|. 
Zfish  1097 MHTGVG---RHSCELCGQTFGTTSRLRLHHQRIHDKQATHFCSVCDYRAYNLNDINRHNLSCHT- 1157

  Fly   441 KSEFKFTCSECNKKFLTERKLKNHMSSMHDPESTIICDKCGKQMRTKIILKKHQELMHSDK---P 502
             .|.::.||:|:.:|.::..||.|...:|...:|:.|.:|....|.:..||.|.:..||:|   |
Zfish  1158 -GELRYHCSQCDARFSSDGALKQHCHRVHSDANTLPCTQCSFTCRGQAALKAHMQSDHSEKTNDP 1221

  Fly   503 RPEPE-------LQQCQICGAWLKGMTGLKQHMKSIHVESAGEH---RCHICAKVSPNARALRRH 557
            :..||       ..:|.:|.........|.|||...|.:...|.   :|.:|.....:.....:|
Zfish  1222 QDNPEKRSKKSITHKCTVCSFNTNKRLLLVQHMLDEHEDGPAEEKTLKCDVCGFSCTHQMVFDQH 1286

  Fly   558 I-YHNHECERKFKCTMCEKAFKRPQELKEHTSTHTGEVLYTCPNCPMTFFCS-ANMYKHRQRLH 619
            | .|...|  .||||.||.:.:..|::..|...||||..|.|..|  .:.|: .:..|:..|:|
Zfish  1287 IRSHGGTC--LFKCTECEFSTRNKQKITWHIRIHTGEKPYRCEKC--NYACADPSRLKYHMRIH 1346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..82 CDD:462262
PLN03237 <81..239 CDD:215641 35/142 (25%)
C2H2 Zn finger 330..351 CDD:275368 5/20 (25%)
C2H2 Zn finger 360..378 CDD:275368 7/20 (35%)
LIM 361..>400 CDD:413332 10/39 (26%)
C2H2 Zn finger 386..406 CDD:275368 6/19 (32%)
C2H2 Zn finger 417..438 CDD:275368 9/49 (18%)
C2H2 Zn finger 448..465 CDD:275368 6/16 (38%)
C2H2 Zn finger 477..498 CDD:275368 6/20 (30%)
C2H2 Zn finger 511..532 CDD:275368 6/20 (30%)
C2H2 Zn finger 541..562 CDD:275368 5/21 (24%)
C2H2 Zn finger 570..590 CDD:275368 6/19 (32%)
C2H2 Zn finger 598..619 CDD:275368 5/21 (24%)
znf142XP_690036.3 COG5048 80..503 CDD:227381
C2H2 Zn finger 86..106 CDD:275368
C2H2 Zn finger 114..134 CDD:275368
C2H2 Zn finger 178..198 CDD:275368
C2H2 Zn finger 242..261 CDD:275368
C2H2 Zn finger 266..316 CDD:275368
zf-H2C2_5 322..346 CDD:404746
C2H2 Zn finger 324..344 CDD:275368
C2H2 Zn finger 352..372 CDD:275368
C2H2 Zn finger 380..400 CDD:275368
C2H2 Zn finger 408..428 CDD:275368
C2H2 Zn finger 435..452 CDD:275368
C2H2 Zn finger 1078..1098 CDD:275370 6/19 (32%)
C2H2 Zn finger 1106..1127 CDD:275368 5/20 (25%)
C2H2 Zn finger 1135..1156 CDD:275368 4/20 (20%)
C2H2 Zn finger 1164..1185 CDD:275368 7/20 (35%)
C2H2 Zn finger 1193..1210 CDD:275368 5/16 (31%)
C2H2 Zn finger 1270..1290 CDD:275368 4/19 (21%)
C2H2 Zn finger 1298..1318 CDD:275368 6/19 (32%)
SFP1 <1320..1375 CDD:227516 9/29 (31%)
C2H2 Zn finger 1326..1346 CDD:275368 5/21 (24%)
C2H2 Zn finger 1354..1374 CDD:275368
C2H2 Zn finger 1382..1403 CDD:275368
C2H2 Zn finger 1411..1431 CDD:275368
C2H2 Zn finger 1439..1459 CDD:275368
C2H2 Zn finger 1467..1487 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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