DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4282 and si:ch73-367f21.4

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_021323881.1 Gene:si:ch73-367f21.4 / 560465 ZFINID:ZDB-GENE-120214-27 Length:1012 Species:Danio rerio


Alignment Length:361 Identity:96/361 - (26%)
Similarity:146/361 - (40%) Gaps:87/361 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   333 CNLLVHN-------------FTEMQ--RHHRLTHQVDPGY------------------------- 357
            |:.::||             ||:|:  ::|...|..|..:                         
Zfish   545 CHTMIHNGEQTFICSECGKSFTQMRYLKNHMKIHSGDHPFTCPECDKCFTVKQSLETHLKIHTGE 609

  Fly   358 --MMC--CGRKFTQRKVLAEHVLVHWNPDHFKCSVCEKSFQNSRHLESHQQVHMDPAVKLTFSCD 418
              .:|  ||:.|..:..|..|:.:|.....:.|.||.|||:..:.||.|..:|..   :..:||.
Zfish   610 KPFICPYCGKNFRIKHSLEGHMRIHTGEKPYPCQVCGKSFREKQSLEKHLTIHTG---EKPYSCP 671

  Fly   419 LCSKTFLSKTAIDYHKLNKHVPKSEFKFTCSECNKKFLTERKLKNHMSSMHDPESTIICDKCGKQ 483
            .|.|:|..|..::.| :..|.  .|..:||.||.|.|..::.||.|| .:|..|....|..|||.
Zfish   672 ECGKSFRVKNCLENH-IKIHT--GEKPYTCQECGKSFTEKQNLKRHM-RIHTGEKPFTCSHCGKS 732

  Fly   484 MRTKIILKKHQELMHSDKPRPEPELQQ-------------------------CQICGAWLKGMTG 523
            .|....||.|..:...:||.   ..||                         |..||...:|...
Zfish   733 FRVSKDLKIHVRIHTGEKPF---SCQQCGKSFSENKKLTSHMRIHTGEKPFVCSHCGKRFRGKQN 794

  Fly   524 LKQHMKSIHVESAGEHR--CHICAKVSPNARALRRHIYHNHECERKFKCTMCEKAFKRPQELKEH 586
            |:.|:: :|   .||.|  |..|.|.....::|..|| .:|..|:.|.|..|.|:|::.:.||.|
Zfish   795 LESHIR-LH---TGEKRYTCPQCGKSYNEQKSLENHI-RSHTGEKPFACDQCGKSFRQQRILKGH 854

  Fly   587 TSTHTGEVLYTCPNCPMTFFCSANMYKHRQRLHRAQ 622
            ...||||..:|||.|..:|.....:.:|: ::|..:
Zfish   855 IRIHTGEKPFTCPQCGKSFIEKTKLERHK-KIHSGE 889

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071
FYDLN_acid <191..268 CDD:302856
C2H2 Zn finger 330..351 CDD:275368 7/32 (22%)
C2H2 Zn finger 360..378 CDD:275368 6/19 (32%)
LIM 361..>400 CDD:295319 12/38 (32%)
C2H2 Zn finger 386..406 CDD:275368 9/19 (47%)
zf-C2H2_8 389..465 CDD:292531 25/75 (33%)
C2H2 Zn finger 417..438 CDD:275368 6/20 (30%)
C2H2 Zn finger 448..465 CDD:275368 7/16 (44%)
C2H2 Zn finger 477..498 CDD:275368 8/20 (40%)
C2H2 Zn finger 511..532 CDD:275368 6/20 (30%)
C2H2 Zn finger 541..562 CDD:275368 6/20 (30%)
C2H2 Zn finger 570..590 CDD:275368 7/19 (37%)
C2H2 Zn finger 598..619 CDD:275368 5/20 (25%)
si:ch73-367f21.4XP_021323881.1 COG5048 16..447 CDD:227381
C2H2 Zn finger 39..59 CDD:275368
C2H2 Zn finger 67..87 CDD:275368
C2H2 Zn finger 95..115 CDD:275368
C2H2 Zn finger 123..143 CDD:275368
C2H2 Zn finger 151..171 CDD:275368
C2H2 Zn finger 179..199 CDD:275368
C2H2 Zn finger 207..227 CDD:275368
C2H2 Zn finger 235..255 CDD:275368
C2H2 Zn finger 263..283 CDD:275368
C2H2 Zn finger 291..311 CDD:275368
COG5048 314..734 CDD:227381 51/195 (26%)
C2H2 Zn finger 319..339 CDD:275368
C2H2 Zn finger 347..367 CDD:275368
C2H2 Zn finger 375..395 CDD:275368
C2H2 Zn finger 403..423 CDD:275368
C2H2 Zn finger 431..451 CDD:275368
C2H2 Zn finger 459..479 CDD:275368
C2H2 Zn finger 530..550 CDD:275368 1/4 (25%)
C2H2 Zn finger 558..578 CDD:275368 4/19 (21%)
COG5048 583..994 CDD:227381 87/323 (27%)
C2H2 Zn finger 586..606 CDD:275368 0/19 (0%)
C2H2 Zn finger 614..634 CDD:275368 6/19 (32%)
C2H2 Zn finger 642..662 CDD:275368 9/19 (47%)
C2H2 Zn finger 670..690 CDD:275368 6/20 (30%)
C2H2 Zn finger 698..718 CDD:275368 9/20 (45%)
C2H2 Zn finger 726..746 CDD:275368 8/19 (42%)
C2H2 Zn finger 754..774 CDD:275368 2/19 (11%)
C2H2 Zn finger 782..802 CDD:275368 6/20 (30%)
C2H2 Zn finger 810..830 CDD:275368 6/20 (30%)
C2H2 Zn finger 838..858 CDD:275368 7/19 (37%)
C2H2 Zn finger 866..886 CDD:275368 5/20 (25%)
C2H2 Zn finger 894..914 CDD:275368
C2H2 Zn finger 922..942 CDD:275368
C2H2 Zn finger 950..970 CDD:275368
C2H2 Zn finger 978..998 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.