DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4282 and zgc:171901

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_003200031.1 Gene:zgc:171901 / 556292 ZFINID:ZDB-GENE-080220-13 Length:381 Species:Danio rerio


Alignment Length:428 Identity:107/428 - (25%)
Similarity:168/428 - (39%) Gaps:105/428 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 QKPKEDIQLD----LKAEELDEFV-------DEETDPDFSCLVPSDNSSEDDGGSDGFDSDSDFE 266
            ::..||::::    :|.||.:|..       :|:||   ..|:..:|...           .|.:
Zfish     5 KEESEDVEIEETFTVKHEETEEAFRVKHEDPEEQTD---LMLLKEENQDL-----------KDVQ 55

  Fly   267 LDNGKQEFAVLPKRTVVRPKKYKKRTKPAEPKVRMSRELLEQRKKQQEEYDVIIAKFFTSVLPCA 331
            .::..:|...|..||.  .|.|.:::.|.                             |:...|.
Zfish    56 EEDQPEEQLNLKTRTT--NKSYLQKSVPE-----------------------------TNSSTCQ 89

  Fly   332 IC--------NLLVH-----------------NFTEM--QRHHRLTHQVDPGY-MMCCGRKFTQR 368
            .|        ||.||                 :||:.  .:.|.:.|..:..| ...||:||.|:
Zfish    90 QCGKSFSGKRNLEVHMRIHTGEKPFTCQHCGKSFTQKGNLKSHMIIHSGEKPYACQICGKKFAQK 154

  Fly   369 KVLAEHVLVHWNPDHFKCSVCEKSFQNSRHLESHQQVHMDPAVKLTFSCDLCSKTFLSKTAIDYH 433
            :..|:|:.:|.....|.|::|.|||....:|:||..:|   :.:..:||..|..||..|..::.|
Zfish   155 RNRADHMRLHTGEKSFTCNLCGKSFTQKGNLKSHLIIH---SGEKPYSCQQCQSTFTQKVHLEQH 216

  Fly   434 KLNKHVPKSEFKFTCSECNKKFLTERKLKNHMSSMHDPESTIICDKCGKQMRTKIILKKHQELMH 498
               ..|...|..|||.:|.|.|..:..|.:||.: |..||..||.:|||....|.....|..:..
Zfish   217 ---MKVHSGEKPFTCDQCGKSFTLKDSLGSHMRA-HTGESQFICHQCGKSFNHKKSFNIHLRVHT 277

  Fly   499 SDKPRPEPELQQCQICGAWLKGMTGLKQHMKSIHVESAGE--HRCHICAKVSPNARALRRHIYHN 561
            .::|      ..|..||...:....|..|:: :|   .||  |.|.:|.|......:|:.|:. .
Zfish   278 GEEP------YTCCWCGRSFRYKASLDVHIR-VH---TGENPHTCRLCGKSFTQKGSLKAHMI-I 331

  Fly   562 HECERKFKCTMCEKAFKRPQELKEHTSTH-TGEVLYTC 598
            |..|:.|.|..|.|:|:|...|.||...| ..|:|..|
Zfish   332 HTGEKPFTCVQCGKSFRRKLTLNEHVKIHIESELLDQC 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071
FYDLN_acid <191..268 CDD:302856 12/65 (18%)
C2H2 Zn finger 330..351 CDD:275368 9/47 (19%)
C2H2 Zn finger 360..378 CDD:275368 7/17 (41%)
LIM 361..>400 CDD:295319 14/38 (37%)
C2H2 Zn finger 386..406 CDD:275368 8/19 (42%)
zf-C2H2_8 389..465 CDD:292531 24/75 (32%)
C2H2 Zn finger 417..438 CDD:275368 6/20 (30%)
C2H2 Zn finger 448..465 CDD:275368 5/16 (31%)
C2H2 Zn finger 477..498 CDD:275368 6/20 (30%)
C2H2 Zn finger 511..532 CDD:275368 5/20 (25%)
C2H2 Zn finger 541..562 CDD:275368 5/20 (25%)
C2H2 Zn finger 570..590 CDD:275368 8/19 (42%)
C2H2 Zn finger 598..619 CDD:275368 1/1 (100%)
zgc:171901XP_003200031.1 COG5048 <38..272 CDD:227381 69/285 (24%)
C2H2 Zn finger 88..108 CDD:275368 6/19 (32%)
zf-H2C2_2 100..125 CDD:290200 5/24 (21%)
C2H2 Zn finger 116..136 CDD:275368 3/19 (16%)
zf-H2C2_2 128..153 CDD:290200 7/24 (29%)
C2H2 Zn finger 144..164 CDD:275368 7/19 (37%)
C2H2 Zn finger 172..192 CDD:275368 8/19 (42%)
C2H2 Zn finger 200..220 CDD:275368 6/22 (27%)
zf-H2C2_2 212..236 CDD:290200 8/26 (31%)
C2H2 Zn finger 228..248 CDD:275368 7/20 (35%)
C2H2 Zn finger 256..276 CDD:275368 6/19 (32%)
C2H2 Zn finger 284..304 CDD:275368 5/20 (25%)
zf-H2C2_2 296..321 CDD:290200 9/28 (32%)
C2H2 Zn finger 312..332 CDD:275368 5/20 (25%)
zf-H2C2_2 324..349 CDD:290200 9/25 (36%)
C2H2 Zn finger 340..360 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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