DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4282 and Plagl2

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_061277.2 Gene:Plagl2 / 54711 MGIID:1933165 Length:496 Species:Mus musculus


Alignment Length:279 Identity:65/279 - (23%)
Similarity:119/279 - (42%) Gaps:58/279 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   385 KCSVCEKSFQNSRHLESHQQVHMDPAVKLTFSCDL--CSKTFLSKTAIDYHKLNKHVP--KSEFK 445
            :|.:....|.|...|..|...|.:   :..:||..  |.|.|.||     :||.:|:.  .::..
Mouse    41 QCEISGTPFSNGEKLRPHSLPHPE---QRPYSCPQLHCGKAFASK-----YKLYRHMATHSAQKP 97

  Fly   446 FTCSECNKKFLTERKLKNHMSSMHDP-ESTIICDKCGKQMRTKIILKKHQELMHSDKPRPEPELQ 509
            ..|..|:|.|..:..|:||:.: ||| :..:.|.:|||...||:                     
Mouse    98 HQCMYCDKMFHRKDHLRNHLQT-HDPNKEALHCSECGKNYNTKL--------------------- 140

  Fly   510 QCQICGAWLKGMTGLKQHMKSIHVESAGEHRCHICAKVSPNARALRRHI-YHNHEC-----ERKF 568
                         |.::|: ::|..|:|:..|.:|.:...:.:||..|: .|:...     |:|.
Mouse   141 -------------GYRRHL-AMHAASSGDLSCKVCLQTFESTQALLEHLKAHSRRVAGGAKEKKH 191

  Fly   569 KCTMCEKAFKRPQELKEHTSTHTGEVLYTCPNCPMTFFCSANMYKHRQRLHRAQYEADKNQPKPP 633
            .|..|::.|...::::.|...|||...:.|..|...|....::.:|.::.|  ..|..|.:.:|.
Mouse   192 PCDHCDRRFYTRKDVRRHLVVHTGRKDFLCQYCAQRFGRKDHLTRHVKKSH--SQELLKIKTEPV 254

  Fly   634 NILKISRNASTQNKPKQEI 652
            ::|.:...:||.: .|:|:
Mouse   255 DMLGLLSCSSTVS-VKEEL 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071
FYDLN_acid <191..268 CDD:302856
C2H2 Zn finger 330..351 CDD:275368
C2H2 Zn finger 360..378 CDD:275368
LIM 361..>400 CDD:295319 3/14 (21%)
C2H2 Zn finger 386..406 CDD:275368 5/19 (26%)
zf-C2H2_8 389..465 CDD:292531 21/79 (27%)
C2H2 Zn finger 417..438 CDD:275368 8/22 (36%)
C2H2 Zn finger 448..465 CDD:275368 6/16 (38%)
C2H2 Zn finger 477..498 CDD:275368 6/20 (30%)
C2H2 Zn finger 511..532 CDD:275368 2/20 (10%)
C2H2 Zn finger 541..562 CDD:275368 6/21 (29%)
C2H2 Zn finger 570..590 CDD:275368 4/19 (21%)
C2H2 Zn finger 598..619 CDD:275368 4/20 (20%)
Plagl2NP_061277.2 C2H2 Zn finger 42..62 CDD:275368 5/19 (26%)
C2H2 Zn finger 70..92 CDD:275368 9/26 (35%)
zf-H2C2_2 85..109 CDD:372612 6/23 (26%)
C2H2 Zn finger 100..120 CDD:275368 7/20 (35%)
C2H2 Zn finger 129..149 CDD:275368 8/54 (15%)
C2H2 Zn finger 158..178 CDD:275368 5/19 (26%)
C2H2 Zn finger 193..213 CDD:275368 4/19 (21%)
C2H2 Zn finger 221..239 CDD:275368 4/17 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.