DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4282 and zgc:113295

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_021326232.1 Gene:zgc:113295 / 541420 ZFINID:ZDB-GENE-050320-122 Length:366 Species:Danio rerio


Alignment Length:410 Identity:115/410 - (28%)
Similarity:170/410 - (41%) Gaps:66/410 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 LKAEELDEFVDEETDPDFSCLVPSDNSSEDDGGSDGFDSDSDFELDNGKQEFAVLPKRT--VVRP 285
            :|.|:.:|.||           |.|.:.|.:.|:|         :..||    :.|.:|  |...
Zfish     9 IKDEDTEESVD-----------PIDGNGETEEGND---------VKAGK----IAPLKTCGVFTV 49

  Fly   286 KKYKKR----TKPAEPKVRMSRELLEQRKKQQEEYDVIIAKFFTSVLP--CAICNLLVHNFTEMQ 344
            |...|.    |:.|        ::|..:|..:     |..:..|..:|  |..|....:..:.:.
Zfish    50 KNGDKNPFTCTRCA--------QILGNKKSLE-----IHMRIHTGEIPFTCTRCGRGFYQLSNLN 101

  Fly   345 RHHRLTHQVDPGYMMCCGRKFTQRKVLAEHVLVHWNPDHFKCSVCEKSFQNSRHLESHQQVHMDP 409
            :|..:.....|.....|||.|.|..:|..|:.||.....|.|:.|.|||..:..|:.|...|.. 
Zfish   102 KHMTIHTGEKPYTCTHCGRGFYQPSLLNRHMRVHTGEKPFTCTQCGKSFNQATQLKQHMMNHTG- 165

  Fly   410 AVKLTFSCDLCSKTFLSKTAIDYHKLNKH--VPKSEFKFTCSECNKKFLTERKLKNHMSSMHDPE 472
              :..|:|..|..:|...:|     ||||  :...|..:||::|...|.....|..|| .:|..|
Zfish   166 --EKPFTCTQCGTSFTQSSA-----LNKHMRIHTGEKPYTCTQCGTSFGASSSLSRHM-LIHTGE 222

  Fly   473 STIICDKCGKQMRTKIILKKHQELMHSDKPRPEPELQQCQICGAWLKGMTGLKQHMKSIHVESAG 537
            .|..||.|.|...:...||.|..:..|:||      ..|.:|.........||:|.| ||. ...
Zfish   223 KTHKCDHCSKTFLSASHLKVHLAVHRSEKP------YSCPVCEKSFTLKCILKRHQK-IHT-GVR 279

  Fly   538 EHRCHICAKVSPNARALRRHIYHNHECERKFKCTMCEKAFKRPQELKEHTSTHTGEVLYTCPNCP 602
            ||.|..|.|...:|..|::| ...|..|:.|||:.|:|.|::...||.|...||||..|.|.:|.
Zfish   280 EHLCFKCVKTFMSAAELKQH-ERIHTGEKPFKCSHCDKRFRQSGSLKTHERIHTGEKPYKCSHCD 343

  Fly   603 MTFFCSANMYKHRQRLHRAQ 622
            ..|..|.::.:| :|:|..:
Zfish   344 KRFSQSESLKRH-ERIHTGE 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071
FYDLN_acid <191..268 CDD:302856 10/44 (23%)
C2H2 Zn finger 330..351 CDD:275368 3/20 (15%)
C2H2 Zn finger 360..378 CDD:275368 7/17 (41%)
LIM 361..>400 CDD:295319 15/38 (39%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
zf-C2H2_8 389..465 CDD:292531 22/77 (29%)
C2H2 Zn finger 417..438 CDD:275368 6/20 (30%)
C2H2 Zn finger 448..465 CDD:275368 4/16 (25%)
C2H2 Zn finger 477..498 CDD:275368 7/20 (35%)
C2H2 Zn finger 511..532 CDD:275368 6/20 (30%)
C2H2 Zn finger 541..562 CDD:275368 6/20 (30%)
C2H2 Zn finger 570..590 CDD:275368 7/19 (37%)
C2H2 Zn finger 598..619 CDD:275368 6/20 (30%)
zgc:113295XP_021326232.1 C2H2 Zn finger 59..79 CDD:275368 5/32 (16%)
COG5048 <71..355 CDD:227381 91/306 (30%)
C2H2 Zn finger 87..107 CDD:275368 3/19 (16%)
C2H2 Zn finger 115..135 CDD:275368 7/19 (37%)
C2H2 Zn finger 143..163 CDD:275368 7/19 (37%)
C2H2 Zn finger 171..191 CDD:275368 8/24 (33%)
C2H2 Zn finger 199..219 CDD:275368 6/20 (30%)
C2H2 Zn finger 227..247 CDD:275368 7/19 (37%)
C2H2 Zn finger 255..275 CDD:275368 6/20 (30%)
C2H2 Zn finger 283..303 CDD:275368 6/20 (30%)
C2H2 Zn finger 311..331 CDD:275368 7/19 (37%)
C2H2 Zn finger 339..359 CDD:275368 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.