DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4282 and LOC496795

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_001011332.2 Gene:LOC496795 / 496795 -ID:- Length:581 Species:Xenopus tropicalis


Alignment Length:526 Identity:114/526 - (21%)
Similarity:192/526 - (36%) Gaps:140/526 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 AAVAPPQ----------KPKEDIQLDLKAEELDEFVDEETDPDFSCLVPSDNSSEDDGGSDGFDS 261
            ||:||.|          :..:..::.:...|:..:..||   ::.||..|:.........|.:..
 Frog    10 AALAPNQWVNTGLFMVPESMQTSKVSVHFSEVAVYFSEE---EWQCLSKSEKDLYQTVTMDSYYM 71

  Fly   262 DSDFELDNGKQEFAVLPKRTVVRPKKYKKRTKPAEPKVRMSRELLEQRK---KQQEEY----DVI 319
            ....:|.|             |:|:..::..:..:|.|...:|:|.::|   .|...|    .|.
 Frog    72 LLSLDLLN-------------VKPEIVQRIEQGRDPSVSCHQEMLWRKKCMGTQAGNYVGTHHVG 123

  Fly   320 IAKFFTSVL---------------------------------------PCAICNLLVHNFTEMQR 345
            :.:.:.:.|                                       .|..|.......:.::.
 Frog   124 LPRSYWTCLDNVLYSQSGDRGLGIAYAPDAFSMPVTKTKHGHKGDRRYTCLECGKTFIQSSHLKS 188

  Fly   346 HHRLTHQVDPGYMMC--CGRKFTQRKVLAEHVLVHWNPDHFKCSVCEKSFQNSRHLESHQQVH-- 406
            |.: ||..:..| .|  ||.:|.::..|.:|...|.....:.|.:|:|:|..:.||..||:.|  
 Frog   189 HQK-THTGEKPY-ACNECGARFAEKSTLVKHQRTHSGEKPYVCLICDKAFSQNSHLTMHQRTHIV 251

  Fly   407 -------------MDP-----AVKLTFSCDLCSKTFLSK-TAIDYHKLNKHVPKSEFKFTCSECN 452
                         :.|     :.:|...|..||:..::| .|:.    |:.:.|.|..:.|::|:
 Frog   252 KETCSECGIIVTNISPYSKIHSAQLQSECSECSQRLVAKLDALS----NRIISKREKIYKCTQCD 312

  Fly   453 KKFLTERKLKNHMSSMHDPESTIICDKCGKQMRTKIILKKHQELMHSDKPRPEPELQQCQICGAW 517
            |:|.....|..|..: |..|...||..|||....:..|..|......:||      ..|..||..
 Frog   313 KRFTRSANLVVHYRT-HTGEKPYICSYCGKTFTDRSNLVSHLRTHTGEKP------YSCIECGKS 370

  Fly   518 LKGMTGLKQHMKS-----------------------IHVESAGEHR---CHICAK-VSPNARALR 555
            ....:.|..|.::                       :|:::....|   |::|.| .|.::..::
 Frog   371 FPYRSALVLHKRTHTGEKPFVCNECGKSFFCNSRLVLHMKAHTGDRPFGCNVCGKSFSCSSTLIK 435

  Fly   556 RHIYHNHECERKFKCTMCEKAFKRPQELKEHTSTHTGEVLYTCPNCPMTFFCSANMYKHRQRLHR 620
            ..|.|..  ||.:.|..|.|||.|...|..|..|||||..|:|.:|...|...:|:..| ||.|:
 Frog   436 HQIIHTG--ERPYVCLECGKAFTRGSHLAIHQRTHTGEKPYSCDDCGKGFTDKSNLASH-QRTHK 497

  Fly   621 A--QYE 624
            .  |||
 Frog   498 GVKQYE 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071
FYDLN_acid <191..268 CDD:302856 12/70 (17%)
C2H2 Zn finger 330..351 CDD:275368 3/20 (15%)
C2H2 Zn finger 360..378 CDD:275368 6/19 (32%)
LIM 361..>400 CDD:295319 11/38 (29%)
C2H2 Zn finger 386..406 CDD:275368 8/19 (42%)
zf-C2H2_8 389..465 CDD:292531 23/96 (24%)
C2H2 Zn finger 417..438 CDD:275368 6/21 (29%)
C2H2 Zn finger 448..465 CDD:275368 5/16 (31%)
C2H2 Zn finger 477..498 CDD:275368 6/20 (30%)
C2H2 Zn finger 511..532 CDD:275368 5/43 (12%)
C2H2 Zn finger 541..562 CDD:275368 6/21 (29%)
C2H2 Zn finger 570..590 CDD:275368 8/19 (42%)
C2H2 Zn finger 598..619 CDD:275368 7/20 (35%)
LOC496795NP_001011332.2 KRAB_A-box 36..96 CDD:383038 12/75 (16%)
COG5048 173..576 CDD:227381 89/347 (26%)
C2H2 Zn finger 173..193 CDD:275368 3/20 (15%)
C2H2 Zn finger 201..221 CDD:275368 6/19 (32%)
C2H2 Zn finger 229..249 CDD:275368 8/19 (42%)
C2H2 Zn finger 308..328 CDD:275368 6/20 (30%)
C2H2 Zn finger 336..356 CDD:275368 6/19 (32%)
C2H2 Zn finger 364..384 CDD:275368 5/19 (26%)
C2H2 Zn finger 392..412 CDD:275368 1/19 (5%)
C2H2 Zn finger 420..440 CDD:275368 5/19 (26%)
C2H2 Zn finger 448..468 CDD:275368 8/19 (42%)
C2H2 Zn finger 476..496 CDD:275368 7/20 (35%)
C2H2 Zn finger 504..524 CDD:275368 114/526 (22%)
C2H2 Zn finger 532..552 CDD:275368
C2H2 Zn finger 560..580 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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