DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4282 and Zfp560

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_001004190.2 Gene:Zfp560 / 434377 MGIID:1915280 Length:754 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071
FYDLN_acid <191..268 CDD:302856
C2H2 Zn finger 330..351 CDD:275368
C2H2 Zn finger 360..378 CDD:275368
LIM 361..>400 CDD:295319
C2H2 Zn finger 386..406 CDD:275368
zf-C2H2_8 389..465 CDD:292531
C2H2 Zn finger 417..438 CDD:275368
C2H2 Zn finger 448..465 CDD:275368
C2H2 Zn finger 477..498 CDD:275368
C2H2 Zn finger 511..532 CDD:275368
C2H2 Zn finger 541..562 CDD:275368
C2H2 Zn finger 570..590 CDD:275368
C2H2 Zn finger 598..619 CDD:275368
Zfp560NP_001004190.2 KRAB 41..97 CDD:214630
KRAB 41..80 CDD:279668
COG5048 276..689 CDD:227381
zf-C2H2 279..301 CDD:278523
C2H2 Zn finger 281..301 CDD:275368
zf-H2C2_2 293..318 CDD:290200
C2H2 Zn finger 309..329 CDD:275368
zf-H2C2_2 322..346 CDD:290200
C2H2 Zn finger 337..357 CDD:275368
zf-H2C2_2 350..373 CDD:290200
C2H2 Zn finger 365..385 CDD:275368
C2H2 Zn finger 393..413 CDD:275368
zf-H2C2_2 406..430 CDD:290200
C2H2 Zn finger 421..441 CDD:275368
zf-H2C2_2 434..458 CDD:290200
C2H2 Zn finger 449..469 CDD:275368
zf-H2C2_2 461..485 CDD:290200
C2H2 Zn finger 477..497 CDD:275368
zf-H2C2_2 489..514 CDD:290200
C2H2 Zn finger 505..525 CDD:275368
zf-H2C2_2 520..541 CDD:290200
C2H2 Zn finger 533..553 CDD:275368
zf-H2C2_2 545..569 CDD:290200
C2H2 Zn finger 561..581 CDD:275368
zf-H2C2_2 574..598 CDD:290200
C2H2 Zn finger 589..609 CDD:275368
zf-H2C2_2 602..626 CDD:290200
C2H2 Zn finger 617..637 CDD:275368
zf-H2C2_2 629..654 CDD:290200
C2H2 Zn finger 645..665 CDD:275368
zf-H2C2_2 661..681 CDD:290200
C2H2 Zn finger 673..693 CDD:275368
C2H2 Zn finger 701..718 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.