DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4282 and CG8388

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_611075.1 Gene:CG8388 / 36763 FlyBaseID:FBgn0034062 Length:572 Species:Drosophila melanogaster


Alignment Length:662 Identity:196/662 - (29%)
Similarity:306/662 - (46%) Gaps:134/662 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CLLCMCEYPAMMGDYIDVHSARGDQLEVTTIVNQHFPVQI--SKESDERICGRCWKIVSDFHTLH 69
            |.||........|: |:..|...|.|.:..|:.:||.:||  ||.:. .:||.||:.:..||..:
  Fly     3 CFLCTQTVDDAAGN-IEFASEEADSLGLRCIIEKHFWLQIPDSKRAG-YVCGPCWEQLLLFHNFY 65

  Fly    70 EFVSAAQSSLQETKVALMEDDPLTQETTSFPEIIKLATQEEEGVTEPQELGGRNFFYPEIKIEEH 134
            ..|..|..:|::|  .|.|..|        ||::..|                        :|||
  Fly    66 LNVEQAHKALEQT--VLKETSP--------PEVVASA------------------------LEEH 96

  Fly   135 ELDTLPRIEILERSANTQENQDQLEGAARRLRKRLKAEDGSSVDKDKDEDGVEETAEPAPPKKRR 199
                                                      :.|.:.:|.|     .|..|:||
  Fly    97 ------------------------------------------IVKSEHDDSV-----AAAVKRRR 114

  Fly   200 GRPRKSDAAVAPPQKPKEDIQLDLKAEELDEFVDEETDPDFSCLVPSDNSSEDDGGSDGFDSDSD 264
            |||||     ...|..:|:::..|:...|:|...|..:.|.:.....::..|.|...|      |
  Fly   115 GRPRK-----VAQQDAREELKSVLEQINLNEIKIEFPEADLTIADVLEDQEEQDFLPD------D 168

  Fly   265 FELDNGKQEFAVLPKRTVVRPKKY------KKRTKPAE-------PKVRMSRELLEQRKKQQEEY 316
            .....|.::..||.|:.....:|.      ::|.:.||       ||::.|:|..:..:   |.|
  Fly   169 CISKEGAEDPEVLEKKPPTLKRKVSGRSRGRRRVQLAERPNTSCLPKIQKSQEFNDYIR---EHY 230

  Fly   317 DVIIAKFFTSVLPCAICNLLVHNFTEMQRHHRLTHQVDPGYMMCCGRKFTQRKVLAEHVLVHWNP 381
            .|          .|.||||.:.:|:||..|.|..|: ..||.|||.|||.:|.||.:|:..|.:|
  Fly   231 KV----------QCHICNLPMEDFSEMLAHVRREHK-QRGYAMCCNRKFLKRGVLVDHLRRHQDP 284

  Fly   382 DHFKCSVCEKSFQNSRHLESHQQVHMDPAVKLTFSCDLCSKTFLSKTAIDYHKLNKHVPKSEFKF 446
            :.||||:|.:...:.|.||.|.::|...:....:.|:.|||.|.|....:.|||. |:|:.::|.
  Fly   285 ETFKCSICGRVMGHRRSLELHMRMHEIKSRGRLYRCEQCSKAFYSAVVYERHKLT-HIPREQWKV 348

  Fly   447 TCSECNKKFLTERKLKNHMSSMHDPESTIICDKCGKQMRTKIILKKHQELMHSDKPRPEPELQQC 511
            .|:.|.|.:.::..::.|:..:|......|||.|||.:|.:..|.:|.| .|:..|:   ...:|
  Fly   349 PCTHCEKTYPSQYTMQQHVKLVHLNLYAKICDVCGKSIRGREALARHME-EHTGGPQ---AAIKC 409

  Fly   512 QICGAWLKGMTGLKQHMKSIH-VESAGEHRCHICAKVSPNARALRRHIYHNHECERKFKCTMCEK 575
            .:|.:.|....||.:|:|.:| .|:....:|..|.|:.|:.:|.:.||.:.|...|..:|.||||
  Fly   410 HLCDSMLTTKYGLARHIKMMHTAENLQPMQCEFCLKICPSLQAHQHHIKYTHNTARSHQCPMCEK 474

  Fly   576 AFKRPQELKEHTSTHTGEVLYTCPNCPMTFFCSANMYKHRQRLHRAQYEADKNQ-----PKPPNI 635
            |||||.|||||.:|||||||||||:||.||..:|||:.||:::||.::|.::::     .|...|
  Fly   475 AFKRPNELKEHMTTHTGEVLYTCPHCPQTFNSNANMHAHRKKVHRKEWEENRHKRLNRSRKSDTI 539

  Fly   636 LKISRNASTQNK 647
            :.:|...:|:.:
  Fly   540 IAVSVRKTTETR 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071 24/75 (32%)
FYDLN_acid <191..268 CDD:302856 20/76 (26%)
C2H2 Zn finger 330..351 CDD:275368 10/20 (50%)
C2H2 Zn finger 360..378 CDD:275368 9/17 (53%)
LIM 361..>400 CDD:295319 16/38 (42%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
zf-C2H2_8 389..465 CDD:292531 21/75 (28%)
C2H2 Zn finger 417..438 CDD:275368 9/20 (45%)
C2H2 Zn finger 448..465 CDD:275368 3/16 (19%)
C2H2 Zn finger 477..498 CDD:275368 9/20 (45%)
C2H2 Zn finger 511..532 CDD:275368 7/20 (35%)
C2H2 Zn finger 541..562 CDD:275368 7/20 (35%)
C2H2 Zn finger 570..590 CDD:275368 15/19 (79%)
C2H2 Zn finger 598..619 CDD:275368 11/20 (55%)
CG8388NP_611075.1 zf-AD <21..77 CDD:285071 19/56 (34%)
C2H2 Zn finger 264..281 CDD:275368 8/16 (50%)
C2H2 Zn finger 289..309 CDD:275368 7/19 (37%)
C2H2 Zn finger 320..340 CDD:275368 9/20 (45%)
C2H2 Zn finger 350..369 CDD:275368 4/18 (22%)
C2H2 Zn finger 440..461 CDD:275368 7/20 (35%)
C2H2 Zn finger 469..489 CDD:275368 15/19 (79%)
C2H2 Zn finger 497..515 CDD:275368 10/17 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45471723
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 1 1.000 - - H134721
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000909
OrthoInspector 1 1.000 - - mtm14827
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24403
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.940

Return to query results.
Submit another query.