DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4282 and Zfp462

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_038966959.1 Gene:Zfp462 / 362522 RGDID:1562123 Length:2565 Species:Rattus norvegicus


Alignment Length:584 Identity:119/584 - (20%)
Similarity:193/584 - (33%) Gaps:213/584 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 CLVPSDNSSEDDG------GSDGFDSDSDFE---LDNGKQEFAVLPKRTVVRPKKYKKRTKPAEP 297
            |:..:|:.|.|..      ||.....:|.|:   .|:..|..|.|.....:..::::||.|..|.
  Rat  1861 CMHYTDHHSRDLKRDFVILGSGPRFQNSTFQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER 1925

  Fly   298 KVRMSRELLEQRK---------KQQ------------EEYDVI--IAKFFTSVLPC--AICNLLV 337
            :    ::||.::|         ||:            :|..|:  ..||...|.|.  ||||.| 
  Rat  1926 R----KQLLSKQKYADGAFADFKQERPFGHLEEAPKIKERKVVGYKCKFCVEVHPTLRAICNHL- 1985

  Fly   338 HNFTEMQRHHRLTHQV------------DPGYMMCCGRKFTQ-------RKVLAEHVLV------ 377
                   |.|.....|            ||.::...|.:..:       .:|...|.|:      
  Rat  1986 -------RKHVQYGSVPAVSAAVKQEAEDPSHLFLDGFEAARDASGTLVGRVDGGHCLLDGMLED 2043

  Fly   378 HWNPDHFKCSVCEKSFQNSRHLESHQQVHMDPAV---KLTFSCDLCSKTFLSKTAIDYHKLNKHV 439
            ...|..:.||.|::...:.:.|.||::.|:..|:   :..:||..||.....:..:|.|....|.
  Rat  2044 ETRPGGYHCSQCDRVLMSMQGLRSHERSHLALAMFTREDKYSCQYCSFVSAFRHNLDRHMQTHHG 2108

  Fly   440 PKSEFKFTCSECNKKFLTERKLKNHMSSMHDPESTIICDKCGKQMRTKIILKKHQELMHSDK--- 501
            ....|:  |..|:.|.....:||.|:...|..|....|..|.....|...||:|...:|...   
  Rat  2109 HHKPFR--CKLCSFKSSYNSRLKTHILKAHAGEHAYKCSWCSFSTMTISQLKEHSLKVHGKALTL 2171

  Fly   502 PRPE---------------------------------PELQQCQICGAWLKGMTGLKQHMKSIHV 533
            |||.                                 |::|| |:            .|.:|..:
  Rat  2172 PRPRIVSLLSSHAHHSSQKATPAEEVEDSNDSSYSEPPDVQQ-QL------------NHYQSAAL 2223

  Fly   534 --------------ESAGEHR-------CHICAKVSPNARALRRHIYHNHECERKFKCTMC---- 573
                          .:||..:       |..|...|...:::|||....|..::.|||..|    
  Rat  2224 ARNNSRVSPVPPSGTAAGTEQKAEAVLHCEFCEFSSGYIQSIRRHYRDKHGGKKLFKCKDCSFYT 2288

  Fly   574 --EKAF-------------KRPQELK---------------EHTSTHTGE--------------- 593
              :.||             :.|::|:               :|...|..|               
  Rat  2289 GFKSAFTMHVEAGHSAVPEEGPKDLRCPLCLYHTKYKRNMIDHIVLHREERVVPIEVCRSKLSKY 2353

  Fly   594 ---VLYTCPNCPMTFFCSA------NMYKHRQ-RLHRAQ---YEADKNQPKPPNIL---KISRN 641
               |::.|..|  ||.||:      ::.||.: |.::.|   ||....:....::.   |:|||
  Rat  2354 LQGVVFRCDKC--TFTCSSDESLQQHIEKHNELRPYKCQLCYYETKHTEELDTHLRDEHKVSRN 2415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071
FYDLN_acid <191..268 CDD:302856 8/34 (24%)
C2H2 Zn finger 330..351 CDD:275368 7/22 (32%)
C2H2 Zn finger 360..378 CDD:275368 4/30 (13%)
LIM 361..>400 CDD:295319 8/51 (16%)
C2H2 Zn finger 386..406 CDD:275368 6/19 (32%)
zf-C2H2_8 389..465 CDD:292531 19/78 (24%)
C2H2 Zn finger 417..438 CDD:275368 5/20 (25%)
C2H2 Zn finger 448..465 CDD:275368 5/16 (31%)
C2H2 Zn finger 477..498 CDD:275368 6/20 (30%)
C2H2 Zn finger 511..532 CDD:275368 3/20 (15%)
C2H2 Zn finger 541..562 CDD:275368 6/20 (30%)
C2H2 Zn finger 570..590 CDD:275368 7/53 (13%)
C2H2 Zn finger 598..619 CDD:275368 9/27 (33%)
Zfp462XP_038966959.1 C2H2 Zn finger 2052..2072 CDD:275368 6/19 (32%)
zf-H2C2_5 2084..2108 CDD:404746 6/23 (26%)
C2H2 Zn finger 2086..2106 CDD:275368 5/19 (26%)
C2H2 Zn finger 2115..2136 CDD:275368 6/20 (30%)
C2H2 Zn finger 2144..2165 CDD:275368 6/20 (30%)
C2H2 Zn finger 2315..2335 CDD:275368 1/19 (5%)
C2H2 Zn finger 2361..2381 CDD:275368 6/21 (29%)
C2H2 Zn finger 2389..2410 CDD:275368 3/20 (15%)
C2H2 Zn finger 2475..2495 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24403
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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