DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4282 and Zfp462

DIOPT Version :10

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_038966959.1 Gene:Zfp462 / 362522 RGDID:1562123 Length:2565 Species:Rattus norvegicus


Alignment Length:584 Identity:119/584 - (20%)
Similarity:193/584 - (33%) Gaps:213/584 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 CLVPSDNSSEDDG------GSDGFDSDSDFE---LDNGKQEFAVLPKRTVVRPKKYKKRTKPAEP 297
            |:..:|:.|.|..      ||.....:|.|:   .|:..|..|.|.....:..::::||.|..|.
  Rat  1861 CMHYTDHHSRDLKRDFVILGSGPRFQNSTFQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER 1925

  Fly   298 KVRMSRELLEQRK---------KQQ------------EEYDVI--IAKFFTSVLPC--AICNLLV 337
            :    ::||.::|         ||:            :|..|:  ..||...|.|.  ||||.| 
  Rat  1926 R----KQLLSKQKYADGAFADFKQERPFGHLEEAPKIKERKVVGYKCKFCVEVHPTLRAICNHL- 1985

  Fly   338 HNFTEMQRHHRLTHQV------------DPGYMMCCGRKFTQ-------RKVLAEHVLV------ 377
                   |.|.....|            ||.::...|.:..:       .:|...|.|:      
  Rat  1986 -------RKHVQYGSVPAVSAAVKQEAEDPSHLFLDGFEAARDASGTLVGRVDGGHCLLDGMLED 2043

  Fly   378 HWNPDHFKCSVCEKSFQNSRHLESHQQVHMDPAV---KLTFSCDLCSKTFLSKTAIDYHKLNKHV 439
            ...|..:.||.|::...:.:.|.||::.|:..|:   :..:||..||.....:..:|.|....|.
  Rat  2044 ETRPGGYHCSQCDRVLMSMQGLRSHERSHLALAMFTREDKYSCQYCSFVSAFRHNLDRHMQTHHG 2108

  Fly   440 PKSEFKFTCSECNKKFLTERKLKNHMSSMHDPESTIICDKCGKQMRTKIILKKHQELMHSDK--- 501
            ....|:  |..|:.|.....:||.|:...|..|....|..|.....|...||:|...:|...   
  Rat  2109 HHKPFR--CKLCSFKSSYNSRLKTHILKAHAGEHAYKCSWCSFSTMTISQLKEHSLKVHGKALTL 2171

  Fly   502 PRPE---------------------------------PELQQCQICGAWLKGMTGLKQHMKSIHV 533
            |||.                                 |::|| |:            .|.:|..:
  Rat  2172 PRPRIVSLLSSHAHHSSQKATPAEEVEDSNDSSYSEPPDVQQ-QL------------NHYQSAAL 2223

  Fly   534 --------------ESAGEHR-------CHICAKVSPNARALRRHIYHNHECERKFKCTMC---- 573
                          .:||..:       |..|...|...:::|||....|..::.|||..|    
  Rat  2224 ARNNSRVSPVPPSGTAAGTEQKAEAVLHCEFCEFSSGYIQSIRRHYRDKHGGKKLFKCKDCSFYT 2288

  Fly   574 --EKAF-------------KRPQELK---------------EHTSTHTGE--------------- 593
              :.||             :.|::|:               :|...|..|               
  Rat  2289 GFKSAFTMHVEAGHSAVPEEGPKDLRCPLCLYHTKYKRNMIDHIVLHREERVVPIEVCRSKLSKY 2353

  Fly   594 ---VLYTCPNCPMTFFCSA------NMYKHRQ-RLHRAQ---YEADKNQPKPPNIL---KISRN 641
               |::.|..|  ||.||:      ::.||.: |.::.|   ||....:....::.   |:|||
  Rat  2354 LQGVVFRCDKC--TFTCSSDESLQQHIEKHNELRPYKCQLCYYETKHTEELDTHLRDEHKVSRN 2415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..82 CDD:462262
PLN03237 <81..239 CDD:215641
C2H2 Zn finger 330..351 CDD:275368 7/22 (32%)
C2H2 Zn finger 360..378 CDD:275368 4/30 (13%)
LIM 361..>400 CDD:413332 8/51 (16%)
C2H2 Zn finger 386..406 CDD:275368 6/19 (32%)
C2H2 Zn finger 417..438 CDD:275368 5/20 (25%)
C2H2 Zn finger 448..465 CDD:275368 5/16 (31%)
C2H2 Zn finger 477..498 CDD:275368 6/20 (30%)
C2H2 Zn finger 511..532 CDD:275368 3/20 (15%)
C2H2 Zn finger 541..562 CDD:275368 6/20 (30%)
C2H2 Zn finger 570..590 CDD:275368 7/53 (13%)
C2H2 Zn finger 598..619 CDD:275368 9/27 (33%)
Zfp462XP_038966959.1 C2H2 Zn finger 2052..2072 CDD:275368 6/19 (32%)
zf-H2C2_5 2084..2108 CDD:404746 6/23 (26%)
C2H2 Zn finger 2086..2106 CDD:275368 5/19 (26%)
C2H2 Zn finger 2115..2136 CDD:275368 6/20 (30%)
C2H2 Zn finger 2144..2165 CDD:275368 6/20 (30%)
C2H2 Zn finger 2315..2335 CDD:275368 1/19 (5%)
C2H2 Zn finger 2361..2381 CDD:275368 6/21 (29%)
C2H2 Zn finger 2389..2410 CDD:275368 3/20 (15%)
C2H2 Zn finger 2475..2495 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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