DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4282 and CG1603

DIOPT Version :10

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_610290.2 Gene:CG1603 / 35683 FlyBaseID:FBgn0033185 Length:586 Species:Drosophila melanogaster


Alignment Length:760 Identity:141/760 - (18%)
Similarity:229/760 - (30%) Gaps:337/760 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CLLCMCEYPAMMGDYIDVHSARGDQLEVTTIVNQHFPVQISKESDERICGRCWKIVSDFHTLHEF 71
            ||.|..|  :.:.|:         :|.:..:.:.|:    .::.|.||.    :|..|...|:..
  Fly    20 CLYCSIE--SELKDW---------ELFIVHVKSAHY----CEDEDVRIN----EIKEDTEELYSV 65

  Fly    72 VSAAQSSL----------------------QETKVALMEDD-----------------------P 91
            |.||..::                      .::|....|:|                       |
  Fly    66 VDAADPAIAYGPDEFFEVIENSNGVDQWMEADSKDIQYEEDATAWSAATNNSWEFGPGGSSLELP 130

  Fly    92 LTQETTSFPEI----IKLATQE-----------EEGVTEPQELG--------GRNFFY------- 126
            ..:|.|...|.    |.|.|.:           |:.:..|::.|        |:.|.:       
  Fly   131 AGKEVTQMDESSQNHIPLNTDDDDVDCSDFFMSEDDLAPPRKPGRPPRRTRPGQVFKFKVSFIRS 195

  Fly   127 -PEI---------------KIEEHELDTLPR-------IEILERSANTQENQDQLEGAARRLRKR 168
             |.:               ..:||..|...|       :|.::|.||.....::|:....:|.  
  Fly   196 NPRVLHLIQAYKEHPCLWNPSDEHYQDEPARSMAYEAIMERMDRKANVLFTVEELKKTLEQLH-- 258

  Fly   169 LKAEDGSSVDKDKDEDGVEETAEPAPPKKRRGR------------PRKSDAAVAPPQKPKED--- 218
                             |:.|.  |...|:||:            ...|.|.|..|::.:||   
  Fly   259 -----------------VQYTL--ALETKQRGKLVGLAARYFAKCEFLSVAPVVTPRENEEDNDL 304

  Fly   219 --IQLDLKAEEL--DEFVDEETDPDFSCLVPSDNSSEDDGGSDGFDSDSDFELDNGKQEFAVLPK 279
              |:|:.|.|.|  ..|:  ||..::..|.   |.:..|.||                       
  Fly   305 TAIKLNFKEENLITTSFI--ETYANYPVLY---NQALPDFGS----------------------- 341

  Fly   280 RTVVRPKKYKKRTKPAEPKVR------------------------MSRELLEQRKKQQEEYDVII 320
             ..:|...:|:..|..:|.|:                        .|:||:::..||:.:|    
  Fly   342 -IEIRADAFKRMAKEFQPVVKANETDVYIAVNKLRRWLYDAIRRLKSKELIQKCSKQEVQY---- 401

  Fly   321 AKFFTSVLPCAICNLLVHNFTEMQRHHRLTHQVDPGYMMCCGRKFTQRKVLAEHVLVHWNPDHFK 385
                     ..:|:.|....:|.|                              ||.        
  Fly   402 ---------LQMCSFLPAKGSESQ------------------------------VLY-------- 419

  Fly   386 CSVCEKSFQNSRHLESHQQVHMDPAVK---LTFSCDLCSKTFLSKTAIDYHKLNKHVPKSEFKFT 447
            |..|:|.|    |.:.:.:||:..|.:   |.:.|..|.:.|.....:|.|||..|.   |.|..
  Fly   420 CDYCDKRF----HGDYNLRVHIVKAHEVGDLPYLCSFCPRRFDRHVDMDRHKLRSHF---ERKLK 477

  Fly   448 CSECNKKFLTERKLKNHMSSMHDPESTIICDKCGKQMRTKIILKKHQELMHSDKPRPEPELQQCQ 512
            |..|.|.|..:..||.| :.:|..|...:||.|||..|.|::                       
  Fly   478 CQYCEKSFAVDTDLKVH-TLIHTGERPHVCDICGKTFRLKLL----------------------- 518

  Fly   513 ICGAWLKGMTGLKQHMKSIHVESAGEHRCHICAKVSPNARALRRHIYHNHECERKFKCTMCEKAF 577
                       |..|:..:|:..                              |.:.|.||.|.|
  Fly   519 -----------LDHHVNGVHLNI------------------------------RPYSCNMCTKTF 542

  Fly   578 KRPQELKEHTSTHTGEVLYTCPNCPMTFFCSANMYKHRQRLHRAQ 622
            ::..||..|...|.......|..|..||:..:::.:|| |.||::
  Fly   543 RKKFELANHIKGHLNIRDKKCEYCDATFYDHSSLSRHR-RSHRSE 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..82 CDD:462262 16/96 (17%)
PLN03237 <81..239 CDD:215641 46/252 (18%)
C2H2 Zn finger 330..351 CDD:275368 4/20 (20%)
C2H2 Zn finger 360..378 CDD:275368 2/17 (12%)
LIM 361..>400 CDD:413332 7/38 (18%)
C2H2 Zn finger 386..406 CDD:275368 5/19 (26%)
C2H2 Zn finger 417..438 CDD:275368 7/20 (35%)
C2H2 Zn finger 448..465 CDD:275368 6/16 (38%)
C2H2 Zn finger 477..498 CDD:275368 7/20 (35%)
C2H2 Zn finger 511..532 CDD:275368 2/20 (10%)
C2H2 Zn finger 541..562 CDD:275368 0/20 (0%)
C2H2 Zn finger 570..590 CDD:275368 8/19 (42%)
C2H2 Zn finger 598..619 CDD:275368 7/20 (35%)
CG1603NP_610290.2 MADF_DNA_bdg 202..287 CDD:463144 16/105 (15%)
MADF_DNA_bdg 321..408 CDD:463144 20/128 (16%)
C2H2 Zn finger 420..441 CDD:275368 7/24 (29%)
COG5048 <424..583 CDD:227381 53/231 (23%)
C2H2 Zn finger 450..471 CDD:275368 7/20 (35%)
C2H2 Zn finger 478..498 CDD:275368 7/20 (35%)
C2H2 Zn finger 506..527 CDD:275368 9/54 (17%)
C2H2 Zn finger 535..555 CDD:275368 8/19 (42%)
C2H2 Zn finger 563..583 CDD:275368 7/20 (35%)

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