DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4282 and CG17568

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_609951.2 Gene:CG17568 / 35198 FlyBaseID:FBgn0032763 Length:513 Species:Drosophila melanogaster


Alignment Length:693 Identity:155/693 - (22%)
Similarity:234/693 - (33%) Gaps:245/693 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CLLCMCEYPAMMGDYIDVH---------SARGDQLEVTTI-VNQHFPVQISKESD--ERICGRCW 59
            |.||..:         |.|         :::|:...|..: :.::|.||:..|.:  ..:|..|:
  Fly    11 CRLCAKD---------DAHGNVKVQMNENSQGNWDNVLIMAIRKYFEVQMQLEDELSSVLCTECY 66

  Fly    60 KIVSDFHTLHEFVSAAQSSL-----------QETKVA-------LMEDDPLTQETTSFPEIIK-- 104
            .::|:.....|.|:..|...           ||..||       |.:||        :..|||  
  Fly    67 TLISELIDFAEHVTKVQDIFEVLRRTETDGDQEMDVAALRQQFGLCDDD--------WTHIIKPI 123

  Fly   105 --LATQEEEGVTEPQELGGRNFFYPEIKIEEHELDTLPRIEILERSANTQENQDQLEGAARRLRK 167
              |..:.:....:|.|| .::|...|...:|        :||.:|:..|...|         .:|
  Fly   124 PALEMESDNVYQKPAEL-LKDFPLAETSSQE--------MEISKRTTTTHLIQ---------TKK 170

  Fly   168 RLKAEDGSSVDKDKDEDGVEETAEPAPPKKRRGRPRKSDAAVAPPQKPKEDIQLDLKAEELDEFV 232
            .::.|                            .|::....:.|....|...|||:: :.|||..
  Fly   171 NVEME----------------------------IPKQEFIDLGPILLEKNTSQLDME-DVLDELP 206

  Fly   233 DEETDPDFSCLVPSDNSSEDDGGSDGFDS---DSDFELDNGKQEFAVLPKRTVVRPKKYKKRTKP 294
            .||..........|..|.|:|..|:..||   |.||           ||                
  Fly   207 QEELSQPRLDSTTSPASMENDVKSEMLDSCEGDDDF-----------LP---------------- 244

  Fly   295 AEPKVRMSRELLEQRKKQQEEYDVIIAKFFTSVLPCAICNLLVHNFTEMQRHHRLTHQVDPGYMM 359
                  :..:|::           ::|...|.       |.|.....|..:..|:          
  Fly   245 ------VDGQLMD-----------LVAVATTP-------NTLESTAEEKAKRGRM---------- 275

  Fly   360 CCGRKFTQRKVLAEHVLVHWNPDHFKCSVCEKSFQNSRHLESH---------QQVHMDPAVKLTF 415
                                     .|..|.|.::|....|.|         ::|.:|   |.|.
  Fly   276 -------------------------DCEKCGKVYRNRASYEKHLERECRRIERRVKVD---KTTT 312

  Fly   416 SCDLCSKTFLSKTAIDYHKLNKHVPKSEFKFTCSECNKKFLTERKLKNHMSSMHDPESTIICDKC 480
            :||:|:||..|.||                               ||.|...:|......|||.|
  Fly   313 TCDICNKTLSSATA-------------------------------LKLHKEGIHQNVKPYICDSC 346

  Fly   481 GKQMRTKIILKKHQELMHSDKPRPEPELQQCQICGAWLKGMTGLKQHMKSIHVESAGEHRCHICA 545
            |||::|...|.:| :|:|::. ||    .:|.:|.|..|....||.|.: ||.|.:  ..|:||.
  Fly   347 GKQLKTITALNEH-KLVHTES-RP----FECTVCKAGFKNRARLKAHYQ-IHAEPS--FVCNICG 402

  Fly   546 KVSPNARALRRH-IYHNHECERKFKCTMCEKAFKRPQELKEHTSTHTGEVLYTCPNCPMTFFCSA 609
            |.....|....| :.|..  ||:.||.:|...|||.:.||.|..:|||...|.|..|..:|.|:|
  Fly   403 KKLQTRRTWNMHKVVHTE--ERRLKCDVCGALFKRSKTLKTHLLSHTGLRPYVCNYCGKSFACNA 465

  Fly   610 NMYKHRQRLH--RAQYEADKNQPKPPNILKISR-NASTQNKPK 649
            |...|:.:.|  ..|.|.....|...|:..:.. ...||..||
  Fly   466 NCRSHKLKKHPQEVQQEDGARLPSRLNVPTLDELRVMTQKLPK 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071 17/96 (18%)
FYDLN_acid <191..268 CDD:302856 21/79 (27%)
C2H2 Zn finger 330..351 CDD:275368 4/20 (20%)
C2H2 Zn finger 360..378 CDD:275368 0/17 (0%)
LIM 361..>400 CDD:295319 4/38 (11%)
C2H2 Zn finger 386..406 CDD:275368 6/28 (21%)
zf-C2H2_8 389..465 CDD:292531 19/84 (23%)
C2H2 Zn finger 417..438 CDD:275368 8/20 (40%)
C2H2 Zn finger 448..465 CDD:275368 2/16 (13%)
C2H2 Zn finger 477..498 CDD:275368 10/20 (50%)
C2H2 Zn finger 511..532 CDD:275368 7/20 (35%)
C2H2 Zn finger 541..562 CDD:275368 7/21 (33%)
C2H2 Zn finger 570..590 CDD:275368 8/19 (42%)
C2H2 Zn finger 598..619 CDD:275368 7/20 (35%)
CG17568NP_609951.2 zf-AD 10..87 CDD:214871 17/84 (20%)
COG5048 <313..471 CDD:227381 64/199 (32%)
C2H2 Zn finger 314..335 CDD:275368 11/51 (22%)
C2H2 Zn finger 343..363 CDD:275368 10/20 (50%)
C2H2 Zn finger 371..391 CDD:275368 7/20 (35%)
C2H2 Zn finger 398..418 CDD:275368 6/19 (32%)
C2H2 Zn finger 426..446 CDD:275368 8/19 (42%)
zf-H2C2_2 439..463 CDD:290200 10/23 (43%)
C2H2 Zn finger 454..475 CDD:275368 7/20 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45471728
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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