DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4282 and CG17568

DIOPT Version :10

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_609951.2 Gene:CG17568 / 35198 FlyBaseID:FBgn0032763 Length:513 Species:Drosophila melanogaster


Alignment Length:693 Identity:155/693 - (22%)
Similarity:234/693 - (33%) Gaps:245/693 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CLLCMCEYPAMMGDYIDVH---------SARGDQLEVTTI-VNQHFPVQISKESD--ERICGRCW 59
            |.||..:         |.|         :::|:...|..: :.::|.||:..|.:  ..:|..|:
  Fly    11 CRLCAKD---------DAHGNVKVQMNENSQGNWDNVLIMAIRKYFEVQMQLEDELSSVLCTECY 66

  Fly    60 KIVSDFHTLHEFVSAAQSSL-----------QETKVA-------LMEDDPLTQETTSFPEIIK-- 104
            .::|:.....|.|:..|...           ||..||       |.:||        :..|||  
  Fly    67 TLISELIDFAEHVTKVQDIFEVLRRTETDGDQEMDVAALRQQFGLCDDD--------WTHIIKPI 123

  Fly   105 --LATQEEEGVTEPQELGGRNFFYPEIKIEEHELDTLPRIEILERSANTQENQDQLEGAARRLRK 167
              |..:.:....:|.|| .::|...|...:|        :||.:|:..|...|         .:|
  Fly   124 PALEMESDNVYQKPAEL-LKDFPLAETSSQE--------MEISKRTTTTHLIQ---------TKK 170

  Fly   168 RLKAEDGSSVDKDKDEDGVEETAEPAPPKKRRGRPRKSDAAVAPPQKPKEDIQLDLKAEELDEFV 232
            .::.|                            .|::....:.|....|...|||:: :.|||..
  Fly   171 NVEME----------------------------IPKQEFIDLGPILLEKNTSQLDME-DVLDELP 206

  Fly   233 DEETDPDFSCLVPSDNSSEDDGGSDGFDS---DSDFELDNGKQEFAVLPKRTVVRPKKYKKRTKP 294
            .||..........|..|.|:|..|:..||   |.||           ||                
  Fly   207 QEELSQPRLDSTTSPASMENDVKSEMLDSCEGDDDF-----------LP---------------- 244

  Fly   295 AEPKVRMSRELLEQRKKQQEEYDVIIAKFFTSVLPCAICNLLVHNFTEMQRHHRLTHQVDPGYMM 359
                  :..:|::           ::|...|.       |.|.....|..:..|:          
  Fly   245 ------VDGQLMD-----------LVAVATTP-------NTLESTAEEKAKRGRM---------- 275

  Fly   360 CCGRKFTQRKVLAEHVLVHWNPDHFKCSVCEKSFQNSRHLESH---------QQVHMDPAVKLTF 415
                                     .|..|.|.::|....|.|         ::|.:|   |.|.
  Fly   276 -------------------------DCEKCGKVYRNRASYEKHLERECRRIERRVKVD---KTTT 312

  Fly   416 SCDLCSKTFLSKTAIDYHKLNKHVPKSEFKFTCSECNKKFLTERKLKNHMSSMHDPESTIICDKC 480
            :||:|:||..|.||                               ||.|...:|......|||.|
  Fly   313 TCDICNKTLSSATA-------------------------------LKLHKEGIHQNVKPYICDSC 346

  Fly   481 GKQMRTKIILKKHQELMHSDKPRPEPELQQCQICGAWLKGMTGLKQHMKSIHVESAGEHRCHICA 545
            |||::|...|.:| :|:|::. ||    .:|.:|.|..|....||.|.: ||.|.:  ..|:||.
  Fly   347 GKQLKTITALNEH-KLVHTES-RP----FECTVCKAGFKNRARLKAHYQ-IHAEPS--FVCNICG 402

  Fly   546 KVSPNARALRRH-IYHNHECERKFKCTMCEKAFKRPQELKEHTSTHTGEVLYTCPNCPMTFFCSA 609
            |.....|....| :.|..  ||:.||.:|...|||.:.||.|..:|||...|.|..|..:|.|:|
  Fly   403 KKLQTRRTWNMHKVVHTE--ERRLKCDVCGALFKRSKTLKTHLLSHTGLRPYVCNYCGKSFACNA 465

  Fly   610 NMYKHRQRLH--RAQYEADKNQPKPPNILKISR-NASTQNKPK 649
            |...|:.:.|  ..|.|.....|...|:..:.. ...||..||
  Fly   466 NCRSHKLKKHPQEVQQEDGARLPSRLNVPTLDELRVMTQKLPK 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..82 CDD:462262 18/97 (19%)
PLN03237 <81..239 CDD:215641 34/168 (20%)
C2H2 Zn finger 330..351 CDD:275368 4/20 (20%)
C2H2 Zn finger 360..378 CDD:275368 0/17 (0%)
LIM 361..>400 CDD:413332 4/38 (11%)
C2H2 Zn finger 386..406 CDD:275368 6/28 (21%)
C2H2 Zn finger 417..438 CDD:275368 8/20 (40%)
C2H2 Zn finger 448..465 CDD:275368 2/16 (13%)
C2H2 Zn finger 477..498 CDD:275368 10/20 (50%)
C2H2 Zn finger 511..532 CDD:275368 7/20 (35%)
C2H2 Zn finger 541..562 CDD:275368 7/21 (33%)
C2H2 Zn finger 570..590 CDD:275368 8/19 (42%)
C2H2 Zn finger 598..619 CDD:275368 7/20 (35%)
CG17568NP_609951.2 zf-AD 10..87 CDD:214871 17/84 (20%)
COG5048 <313..471 CDD:227381 64/199 (32%)
C2H2 Zn finger 314..335 CDD:275368 11/51 (22%)
C2H2 Zn finger 343..363 CDD:275368 10/20 (50%)
C2H2 Zn finger 371..391 CDD:275368 7/20 (35%)
C2H2 Zn finger 398..418 CDD:275368 6/19 (32%)
C2H2 Zn finger 426..446 CDD:275368 8/19 (42%)
C2H2 Zn finger 454..475 CDD:275368 7/20 (35%)

Return to query results.
Submit another query.