DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4282 and ab

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_476562.1 Gene:ab / 34560 FlyBaseID:FBgn0264442 Length:904 Species:Drosophila melanogaster


Alignment Length:84 Identity:26/84 - (30%)
Similarity:36/84 - (42%) Gaps:9/84 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   449 SECNKKFLTERKLKNHMSSMHDPESTIICDKCGKQMRTKIILKKHQELMHSDKPRPEPELQQCQI 513
            |..|..|::.|.|:..:.:. ||..   |.||||..|:...|:.|.|..|:..|.     .:|.:
  Fly   522 SGINSDFVSRRSLEMRVRAT-DPRP---CPKCGKIYRSAHTLRTHLEDKHTVCPG-----YRCVL 577

  Fly   514 CGAWLKGMTGLKQHMKSIH 532
            ||...|....|..||...|
  Fly   578 CGTVAKSRNSLHSHMSRQH 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071
FYDLN_acid <191..268 CDD:302856
C2H2 Zn finger 330..351 CDD:275368
C2H2 Zn finger 360..378 CDD:275368
LIM 361..>400 CDD:295319
C2H2 Zn finger 386..406 CDD:275368
zf-C2H2_8 389..465 CDD:292531 5/15 (33%)
C2H2 Zn finger 417..438 CDD:275368
C2H2 Zn finger 448..465 CDD:275368 5/15 (33%)
C2H2 Zn finger 477..498 CDD:275368 9/20 (45%)
C2H2 Zn finger 511..532 CDD:275368 7/20 (35%)
C2H2 Zn finger 541..562 CDD:275368
C2H2 Zn finger 570..590 CDD:275368
C2H2 Zn finger 598..619 CDD:275368
abNP_476562.1 BTB 93..189 CDD:279045
BTB 104..189 CDD:197585
zf-Di19 545..597 CDD:283297 19/60 (32%)
C2H2 Zn finger 546..567 CDD:275371 9/20 (45%)
C2H2 Zn finger 575..596 CDD:275371 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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