DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4282 and Zscan2

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_001369440.1 Gene:Zscan2 / 22691 MGIID:99176 Length:614 Species:Mus musculus


Alignment Length:655 Identity:162/655 - (24%)
Similarity:231/655 - (35%) Gaps:204/655 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 EYPAM---MGDYIDVHSARGDQLEVTTIVNQHFPVQISKESDERICGRCWKIVSDFHTLHEFVSA 74
            |.||:   :...:.|.....:|.||||::         .|.|      .|               
Mouse     4 EVPAVSTPLSPLVQVPQEEDEQAEVTTMI---------LEDD------AW--------------- 38

  Fly    75 AQSSLQETKVALMEDDPLTQETTSFPEII-KLATQEEEGVTEPQ-------ELGGRNFFYPEIKI 131
                :||  ..|.||.|   |:..||:.. |.:.|||:....||       || .|.:..||:..
Mouse    39 ----VQE--AVLQEDGP---ESEPFPQSAGKGSPQEEDAAEGPQGALVRFREL-CRRWLRPEVHT 93

  Fly   132 EEHELDTLPRIEILERSANTQENQDQLEGAARRLRKRLKAEDGSSVDKDKDEDGVEETAEPAPPK 196
            :|..|..|||    |..|..||:                                          
Mouse    94 KEQMLTVLPR----EIQAWLQEH------------------------------------------ 112

  Fly   197 KRRGRPRKSDAAVAPPQKPKEDIQLDLKAEELDEFVDEETDPDFSCLVPSDNSSED--------- 252
                ||..|:.|||    ..||:....:..:.:  :..|.         .:||:||         
Mouse   113 ----RPESSEEAVA----LVEDLTQTFRHSDFE--IQSEN---------GENSNEDMFEGVESHG 158

  Fly   253 -----DGGSDG--FDSDSDFELD---NGKQEFAVLPKRTVVRPKKYKKRTKPAE-PKVRMS--RE 304
                 .||..|  .|.|||||.|   .|.|..|                  |.| |:|..|  ||
Mouse   159 MFLNISGGEGGQQSDGDSDFERDCGSGGAQGHA------------------PGEDPRVVPSEGRE 205

  Fly   305 L-----LEQRKKQQEEYDVIIAKFFTSVLPCAICNLLVHNFTEMQRHHRLTHQ---VDPGYMMC- 360
            :     |:.....::.|:            |..|..     |..::.|.:||:   ....|..| 
Mouse   206 VGQLIGLQGTYLGEKPYE------------CPQCGK-----TFSRKSHLITHERTHTGEKYYKCD 253

  Fly   361 -CGRKFTQRKVLAEHVLVHWNPDHFKCSVCEKSFQNSRHLESHQQVHMDPAVKLTFSCDLCSKTF 424
             ||:.|:.....:.|...|.....:||..|.|||..|.:|.:||::|..   :..|.|..|.|:|
Mouse   254 ECGKSFSDGSNFSRHQTTHTGEKPYKCRDCGKSFSRSANLITHQRIHTG---EKPFQCAECGKSF 315

  Fly   425 LSKTAIDYHKLNKHVPKSEFKFTCSECNKKFLTERKLKNHMSSMHDPESTIICDKCGKQMRTKII 489
            .....:..|: ..|.  .|..::|.||.|.|.....|..| ..:|..|....|.:||:.......
Mouse   316 SRSPNLIAHQ-RTHT--GEKPYSCPECGKSFGNRSSLNTH-QGIHTGEKPYACKECGESFSYNSN 376

  Fly   490 LKKHQELMHSDKPRPEPELQQCQICGAWLKGMTGLKQHMKSIHVESAGE--HRCHICAKVSPNAR 552
            |.:||.:...:||      .:|..||......:.|..|.::    ..||  ::|..|.|....:.
Mouse   377 LIRHQRIHTGEKP------YKCTECGQKFSQSSALITHRRT----HTGEKPYQCGECGKNFSRSS 431

  Fly   553 ALRRHIYHNHECERKFKCTMCEKAFKRPQELKEHTSTHTGEVLYTCPNCPMTFFCSANMYKHRQR 617
            .|..| ...|..|:.:||.:|.|:|.:...|..|..|||||..|.|..|..:|..|:|:.|| ||
Mouse   432 NLATH-RRTHLVEKPYKCGLCGKSFSQSSSLIAHQGTHTGEKPYECLTCGESFSWSSNLIKH-QR 494

  Fly   618 LHRAQ 622
            .|..:
Mouse   495 THTGE 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071 12/70 (17%)
FYDLN_acid <191..268 CDD:302856 22/92 (24%)
C2H2 Zn finger 330..351 CDD:275368 4/20 (20%)
C2H2 Zn finger 360..378 CDD:275368 5/19 (26%)
LIM 361..>400 CDD:295319 12/38 (32%)
C2H2 Zn finger 386..406 CDD:275368 9/19 (47%)
zf-C2H2_8 389..465 CDD:292531 23/75 (31%)
C2H2 Zn finger 417..438 CDD:275368 5/20 (25%)
C2H2 Zn finger 448..465 CDD:275368 6/16 (38%)
C2H2 Zn finger 477..498 CDD:275368 6/20 (30%)
C2H2 Zn finger 511..532 CDD:275368 5/20 (25%)
C2H2 Zn finger 541..562 CDD:275368 5/20 (25%)
C2H2 Zn finger 570..590 CDD:275368 6/19 (32%)
C2H2 Zn finger 598..619 CDD:275368 9/20 (45%)
Zscan2NP_001369440.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 4/20 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..73 11/33 (33%)
SCAN 69..131 CDD:396558 24/116 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 162..200 17/55 (31%)
COG5048 220..600 CDD:227381 87/316 (28%)
C2H2 Zn finger 224..244 CDD:275368 6/24 (25%)
C2H2 Zn finger 252..272 CDD:275368 5/19 (26%)
C2H2 Zn finger 280..300 CDD:275368 9/19 (47%)
C2H2 Zn finger 308..328 CDD:275368 5/20 (25%)
C2H2 Zn finger 336..356 CDD:275368 7/20 (35%)
C2H2 Zn finger 364..384 CDD:275368 6/19 (32%)
C2H2 Zn finger 392..412 CDD:275368 5/23 (22%)
C2H2 Zn finger 420..440 CDD:275368 5/20 (25%)
C2H2 Zn finger 448..468 CDD:275368 6/19 (32%)
C2H2 Zn finger 476..496 CDD:275368 9/20 (45%)
C2H2 Zn finger 504..524 CDD:275368
C2H2 Zn finger 532..552 CDD:275368
C2H2 Zn finger 560..580 CDD:275368
C2H2 Zn finger 588..608 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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