DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4282 and F47E1.20

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_001360749.1 Gene:F47E1.20 / 185936 WormBaseID:WBGene00304808 Length:322 Species:Caenorhabditis elegans


Alignment Length:225 Identity:66/225 - (29%)
Similarity:99/225 - (44%) Gaps:20/225 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 DGFDSDSDFELDNGKQEFAVLPKRT--VVRPKKYKKRTKPAEPKVRMSRELLEQRKKQQEEYDVI 319
            |||.:.::.||.:....||.....:  :|..|........||  :.:||...|.||.:.||.::|
 Worm   102 DGFKAGTNLELPDAWWRFAKESSHSANIVHSKVVTDIACGAE--IVISRTPTEDRKSEVEEPEII 164

  Fly   320 --IAKFFTSV---LPCAICNLLVHNFTEMQRHHRLTHQVDPG--YMMC--CGRKFTQRKVLAEHV 375
              :||...:|   ..|..|..:........:|.:.|..||.|  ...|  |.|.|.:|..|..|:
 Worm   165 DDVAKKNENVSNGFSCERCGKVFSYEYYRDKHLKYTRCVDNGNRKFPCTICNRSFEKRDRLRIHI 229

  Fly   376 L-VHWNPDHFKCSVCEKSFQNSRHLESHQQVHMDPAVKLTFSCDLCSKTFLSKTAIDYHKLNKHV 439
            | ||.|.....||||:|||..|..|..|.:||   :.:..:.|..|.|.|.:.:.:..| :.:|.
 Worm   230 LHVHENHRPHVCSVCQKSFSQSSSLNKHLRVH---SGERPYKCSFCPKAFTASSILRTH-VRQHS 290

  Fly   440 PKSEFKFTCSECNKKFLTERKLKNHMSSMH 469
            .:..||  |:.|.|.|.:.....:|:...|
 Worm   291 GEKPFK--CAHCGKAFASHAAHDSHVRRSH 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071
FYDLN_acid <191..268 CDD:302856 4/10 (40%)
C2H2 Zn finger 330..351 CDD:275368 3/20 (15%)
C2H2 Zn finger 360..378 CDD:275368 8/20 (40%)
LIM 361..>400 CDD:295319 18/39 (46%)
C2H2 Zn finger 386..406 CDD:275368 10/19 (53%)
zf-C2H2_8 389..465 CDD:292531 21/75 (28%)
C2H2 Zn finger 417..438 CDD:275368 5/20 (25%)
C2H2 Zn finger 448..465 CDD:275368 4/16 (25%)
C2H2 Zn finger 477..498 CDD:275368
C2H2 Zn finger 511..532 CDD:275368
C2H2 Zn finger 541..562 CDD:275368
C2H2 Zn finger 570..590 CDD:275368
C2H2 Zn finger 598..619 CDD:275368
F47E1.20NP_001360749.1 SFP1 <123..290 CDD:227516 50/172 (29%)
C2H2 Zn finger 180..204 CDD:275368 4/23 (17%)
C2H2 Zn finger 212..231 CDD:275368 7/18 (39%)
C2H2 Zn finger 241..261 CDD:275368 10/19 (53%)
zf-H2C2_2 253..277 CDD:372612 7/26 (27%)
C2H2 Zn finger 269..289 CDD:275368 5/20 (25%)
zf-H2C2_2 282..306 CDD:372612 8/26 (31%)
C2H2 Zn finger 297..315 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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