DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4282 and PRDM5

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_001366033.1 Gene:PRDM5 / 11107 HGNCID:9349 Length:641 Species:Homo sapiens


Alignment Length:648 Identity:146/648 - (22%)
Similarity:236/648 - (36%) Gaps:158/648 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 QHFPVQISKESDERICGRCWKIVSDFHTLHEFVSAAQSSLQETKVALMEDDPLTQETTSFPEIIK 104
            :..|..:.:..|.|:   .|::              :.|..|....|...:|.......|  :.:
Human    42 KRMPEDLDENMDYRL---MWEV--------------RGSKGEVLYILDATNPRHSNWLRF--VHE 87

  Fly   105 LATQEEEGVTEPQELGGRNFFYPEIKIEEHELDTLPRIEILERSANTQENQDQL-----EGAARR 164
            ..:||::.:...||  |.|.||  :.:|:.|.||...|..|:.....:|.:.|:     ||....
Human    88 APSQEQKNLAAIQE--GENIFY--LAVEDIETDTELLIGYLDSDMEAEEEEQQIMTVIKEGEVEN 148

  Fly   165 LRKRLKAEDGSSVDKDKDEDGVEETAEPAPPKKRRGRPRKSDAAVAPPQKPKEDIQLDLKAEELD 229
            .|::       |....||..|.:|.                   .|.||........|:.||.|.
Human   149 SRRQ-------STAGRKDRLGCKED-------------------YACPQCESSFTSEDILAEHLQ 187

  Fly   230 EFVDEET-DPDFSC-------------------------LVPSDNSSEDDGGSDGFDSDSDFELD 268
            ....:.| :.:|.|                         |..|..|.:....:..|.|.|.||  
Human   188 TLHQKPTEEKEFKCKNCGKKFPVKQALQRHVLQCTAKSSLKESSRSFQCSVCNSSFSSASSFE-- 250

  Fly   269 NGKQEFAVLPKRTVVRPKKYKKRTKPAEPKVRMSRELLEQRKKQQEEYDVIIAKFFTSVLPCAIC 333
             ..||......|.|.:.....||.|        |::.|   |:.||.......|   ..|.|::|
Human   251 -QHQETCRGDARFVCKADSCGKRLK--------SKDAL---KRHQENVHTGDPK---KKLICSVC 300

  Fly   334 NLLVHNFTEMQRHHRLTHQVDPGYMMC--CGRKFTQRKVLAEHVLVHWN-------------PDH 383
            |....:.:.:|.|.:: |::    ..|  |.:||.....|..|::.|.:             |  
Human   301 NKKCSSASSLQEHRKI-HEI----FDCQECMKKFISANQLKRHMITHSDMRLSPLIFLIEKRP-- 358

  Fly   384 FKCSVCEKSFQNSRHLESHQQVHMDPAVKLTFSCDLCSKTFLSKTAIDYHKLNKHVPKSEFKFTC 448
            :.|.:|.|||:....:.:|:.:|.:..   .:.|.||.|.|..:   :.:|.:|.....|..|.|
Human   359 YNCEICNKSFKRLDQVGAHKVIHSEDK---PYKCKLCGKGFAHR---NVYKNHKKTHSEERPFQC 417

  Fly   449 SECNKKFLTERKLKNHMSSMHDPESTIICDKCGKQMRTKIILKKHQELMHSDKPRPEPELQQCQI 513
            .||...|.|...|:.|: .:|:.|.|..|..|....:.|..|..|.:::|....:     .:|::
Human   418 EECKALFRTPFSLQRHL-LIHNSERTFKCHHCDATFKRKDTLNVHVQVVHERHKK-----YRCEL 476

  Fly   514 CGAWLKGMTGLKQHMKS-----------------------IHVES-AGE--HRCHICAKVSPNAR 552
            |.......:.|:.|.|:                       :|:.| .||  ::|..|.|......
Human   477 CNKAFVTPSVLRSHKKTHTGEKEKICPYCGQKFASSGTLRVHIRSHTGERPYQCPYCEKGFSKND 541

  Fly   553 ALRRHIYHNHECERKFKCTMCEKAFKRPQELKEHTSTHTGEVLYTCPNCPMTFFCSANMYKHR 615
            .|:.|| ..|..|:.:||:.|.|||.:.:.|.||..|||||..:.|..|.:.|.....:.:|:
Human   542 GLKMHI-RTHTREKPYKCSECSKAFSQKRGLDEHKRTHTGEKPFQCDVCDLAFSLKKMLIRHK 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071 5/40 (13%)
FYDLN_acid <191..268 CDD:302856 18/102 (18%)
C2H2 Zn finger 330..351 CDD:275368 5/20 (25%)
C2H2 Zn finger 360..378 CDD:275368 6/19 (32%)
LIM 361..>400 CDD:295319 12/51 (24%)
C2H2 Zn finger 386..406 CDD:275368 6/19 (32%)
zf-C2H2_8 389..465 CDD:292531 21/75 (28%)
C2H2 Zn finger 417..438 CDD:275368 6/20 (30%)
C2H2 Zn finger 448..465 CDD:275368 6/16 (38%)
C2H2 Zn finger 477..498 CDD:275368 5/20 (25%)
C2H2 Zn finger 511..532 CDD:275368 5/43 (12%)
C2H2 Zn finger 541..562 CDD:275368 6/20 (30%)
C2H2 Zn finger 570..590 CDD:275368 8/19 (42%)
C2H2 Zn finger 598..619 CDD:275368 4/18 (22%)
PRDM5NP_001366033.1 PR-SET_PRDM5 2..128 CDD:380967 23/108 (21%)
COG5048 <145..338 CDD:227381 49/240 (20%)
C2H2 Zn finger 169..190 CDD:275368 6/20 (30%)
C2H2 Zn finger 201..221 CDD:275368 1/19 (5%)
C2H2 Zn finger 236..256 CDD:275368 7/22 (32%)
COG5048 262..631 CDD:227381 92/376 (24%)
C2H2 Zn finger 264..287 CDD:275368 8/33 (24%)
C2H2 Zn finger 297..317 CDD:275368 5/20 (25%)
C2H2 Zn finger 322..342 CDD:275368 6/19 (32%)
C2H2 Zn finger 361..381 CDD:275368 6/19 (32%)
C2H2 Zn finger 389..409 CDD:275368 7/22 (32%)
C2H2 Zn finger 417..437 CDD:275368 7/20 (35%)
C2H2 Zn finger 445..462 CDD:275368 4/16 (25%)
C2H2 Zn finger 474..494 CDD:275368 5/19 (26%)
C2H2 Zn finger 502..522 CDD:275368 1/19 (5%)
C2H2 Zn finger 530..550 CDD:275368 6/20 (30%)
C2H2 Zn finger 558..578 CDD:275368 8/19 (42%)
C2H2 Zn finger 586..606 CDD:275368 4/18 (22%)
C2H2 Zn finger 615..636 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.