DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4282 and LOC110439430

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_021331131.1 Gene:LOC110439430 / 110439430 -ID:- Length:390 Species:Danio rerio


Alignment Length:356 Identity:98/356 - (27%)
Similarity:144/356 - (40%) Gaps:52/356 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   266 ELDNGKQEFAVLPKRTVVRPKKYKKRTKPAEPKVRMSRELLEQRKKQQEEYDVIIAKFFTSVLPC 330
            |:|. ||:|.        :||:.....||...|...|.|.|.:.|....             ..|
Zfish    12 EIDE-KQQFE--------KPKEIMTDEKPPLTKKTSSHERLRKSKSGCN-------------FSC 54

  Fly   331 AICNLLVHNFTEMQRHHRLTHQVDPGYMMC--CGRKFTQRKVLAEHVLVHWNPDHFKCSVCEKSF 393
            ..|.......:::..|.|: |..:..| .|  ||:.|:|.:....|:.:|.....|.|..|.|||
Zfish    55 KQCRKSFSQKSKLDVHMRV-HTGEKPY-TCEQCGKSFSQIQGFKAHMRIHTGKKKFPCQECGKSF 117

  Fly   394 QNSRHLESHQQVHMDPAVKLTFSCDLCSKTFLSKTAIDYHKLNKHVPKSEFKFTCSECNKKFLTE 458
            .::.:|.:|.::|..   :..|||..|.|:|..|..:|.|   ..:...|..|:|.:|.|.|..:
Zfish   118 YHAGNLAAHMRIHTG---EKPFSCKQCGKSFSQKPNLDIH---MRIHNGEKPFSCKQCGKSFCQK 176

  Fly   459 RKLKNHMSSMHDPESTIICDKCGKQMRTKIILKKHQELMHSDKPRPEPELQQCQICGAWLKGMTG 523
            ..|.:|| .:|..|....|::|||....|..|..|..:...::..|      ||.||........
Zfish   177 PNLDDHM-RVHTGEKPYTCEQCGKSFSQKQSLNTHMRIHTGERKFP------CQQCGKSFYHAGN 234

  Fly   524 LKQHMKSIHVESAGE--HRCHICAK---VSPNARALRRHIYHNHECERKFKCTMCEKAFKRPQEL 583
            |..||::    ..||  ..|..|.|   ..||..|..|    .|..|:.:.|..|.|:..:.|:|
Zfish   235 LAAHMRT----HTGEKPFSCKQCGKSFSKKPNLIAHMR----VHTSEKPYTCEQCGKSLGKKQDL 291

  Fly   584 KEHTSTHTGEVLYTCPNCPMTFFCSANMYKH 614
            ..|...||||..:||..|..:|...|::..|
Zfish   292 YIHMRIHTGEKPFTCDQCGKSFSTKASLKNH 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071
FYDLN_acid <191..268 CDD:302856 1/1 (100%)
C2H2 Zn finger 330..351 CDD:275368 4/20 (20%)
C2H2 Zn finger 360..378 CDD:275368 6/19 (32%)
LIM 361..>400 CDD:295319 12/38 (32%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
zf-C2H2_8 389..465 CDD:292531 23/75 (31%)
C2H2 Zn finger 417..438 CDD:275368 7/20 (35%)
C2H2 Zn finger 448..465 CDD:275368 5/16 (31%)
C2H2 Zn finger 477..498 CDD:275368 7/20 (35%)
C2H2 Zn finger 511..532 CDD:275368 7/20 (35%)
C2H2 Zn finger 541..562 CDD:275368 7/23 (30%)
C2H2 Zn finger 570..590 CDD:275368 6/19 (32%)
C2H2 Zn finger 598..619 CDD:275368 5/17 (29%)
LOC110439430XP_021331131.1 C2H2 Zn finger 54..74 CDD:275368 4/20 (20%)
COG5048 78..>382 CDD:227381 79/267 (30%)
C2H2 Zn finger 82..102 CDD:275368 6/19 (32%)
C2H2 Zn finger 110..130 CDD:275368 7/19 (37%)
C2H2 Zn finger 138..158 CDD:275368 7/22 (32%)
C2H2 Zn finger 166..186 CDD:275368 7/20 (35%)
C2H2 Zn finger 194..214 CDD:275368 7/19 (37%)
C2H2 Zn finger 222..242 CDD:275368 7/23 (30%)
C2H2 Zn finger 250..270 CDD:275368 7/23 (30%)
C2H2 Zn finger 278..298 CDD:275368 6/19 (32%)
C2H2 Zn finger 306..326 CDD:275368 5/17 (29%)
C2H2 Zn finger 334..354 CDD:275368
C2H2 Zn finger 362..382 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.