DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4282 and LOC108648854

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_017952887.2 Gene:LOC108648854 / 108648854 -ID:- Length:530 Species:Xenopus tropicalis


Alignment Length:489 Identity:116/489 - (23%)
Similarity:175/489 - (35%) Gaps:93/489 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 ED-IQLDLKAEELDEFVDEETDPDFSCLVPSDNSSEDDGGSDGFDSDSDFELDNGKQEFAVLPKR 280
            || :.:.:||    |....|.|..|...:...:.|...|.|  .|:.:..::........::.:.
 Frog    11 EDYVSVVVKA----ELASSEGDRHFEDQIQGIDKSTVMGRS--LDNSTTEQIQGTDTPTPIMGRS 69

  Fly   281 TVVRPKKYKKRTKPAEPKVRMSRELLEQRKKQQEEYDVIIAKFFT---------------SVLPC 330
            .|....||.:....:..|..::...|..:....|.:     |.||               ....|
 Frog    70 PVKTSNKYDENADTSPDKSGIATNTLCNKYSCNECH-----KHFTDRRKFGKHQGMHKRGKPFSC 129

  Fly   331 AICNLLVHNFTEMQRHHRLTHQVDPGYMMC--CGRKFTQRKVLAEHVLVHWNPDHFKCSVCEKSF 393
            :.|.........:.|||| ||..:..: :|  ||:.|:.:..|.:|...|.....:.||.|.:||
 Frog   130 SECGKCFPCRWNLDRHHR-THTGEKPF-LCTECGKCFSCQSDLKKHYRTHTGEKPYSCSECGRSF 192

  Fly   394 QNSRHLESHQQVHMDPAVKLTFSCDLCSKTFLSKTAIDYHKLNKHVPKSEF-------------- 444
            ....||:.|.:.|..   :..|||..|.|.|.|...::.|:...|..:..|              
 Frog   193 SYQSHLKEHYRTHTG---EKPFSCSECGKCFASLYILNVHQRRTHTGEKPFCCSECGESFAASSE 254

  Fly   445 ------------KFTCSECNKKFLTERKLKNHMSSMHDPESTIICDKCGKQMRTKIILKKHQELM 497
                        .::||||.|.|.....|.||..: |..|....|.:|||....:..||:|....
 Frog   255 LTVHRKTHTGEKPYSCSECGKCFSFRSHLYNHRRT-HTKEKPFSCSECGKCFPYQSCLKEHYRTH 318

  Fly   498 HSDKPRPEPELQQCQICGAWLKGMTGLKQHMKSIHVESAGE--HRCHICAKVSPNARALRRHIYH 560
            ..:||      ..|..||.....:..|..|.:..|   :||  ..|..|.|....:..|..|...
 Frog   319 TGEKP------FACSDCGKCFAMLYNLNVHHRRTH---SGEKPFSCSDCEKSFATSSDLTSHRRR 374

  Fly   561 NHECERKFKCTMCEKAFKRPQELKEHTSTHTGEVLYTCPNCPMTFFCSANMYKHRQRLHRAQYEA 625
            .|..|:.|.|::|.|.|....||..|..||||:.|:.|..|...|..|:....|::|.|      
 Frog   375 THTGEKPFSCSICGKCFAFSSELTVHGRTHTGKKLFPCSECGEYFASSSERICHQRRHH------ 433

  Fly   626 DKNQPKP------------PNILKISRNASTQNK 647
               ..||            |:::|......|:.|
 Frog   434 ---PKKPFSCSECGKCFSGPSVIKEHLKTQTEEK 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071
FYDLN_acid <191..268 CDD:302856 12/51 (24%)
C2H2 Zn finger 330..351 CDD:275368 6/20 (30%)
C2H2 Zn finger 360..378 CDD:275368 6/19 (32%)
LIM 361..>400 CDD:295319 12/38 (32%)
C2H2 Zn finger 386..406 CDD:275368 8/19 (42%)
zf-C2H2_8 389..465 CDD:292531 25/101 (25%)
C2H2 Zn finger 417..438 CDD:275368 6/20 (30%)
C2H2 Zn finger 448..465 CDD:275368 8/16 (50%)
C2H2 Zn finger 477..498 CDD:275368 7/20 (35%)
C2H2 Zn finger 511..532 CDD:275368 5/20 (25%)
C2H2 Zn finger 541..562 CDD:275368 5/20 (25%)
C2H2 Zn finger 570..590 CDD:275368 7/19 (37%)
C2H2 Zn finger 598..619 CDD:275368 6/20 (30%)
LOC108648854XP_017952887.2 C2H2 Zn finger 101..121 CDD:275368 4/24 (17%)
COG5048 125..510 CDD:227381 95/364 (26%)
C2H2 Zn finger 129..149 CDD:275368 6/20 (30%)
C2H2 Zn finger 157..177 CDD:275368 6/19 (32%)
C2H2 Zn finger 185..205 CDD:275368 8/19 (42%)
C2H2 Zn finger 213..234 CDD:275368 6/20 (30%)
C2H2 Zn finger 242..262 CDD:275368 0/19 (0%)
C2H2 Zn finger 270..290 CDD:275368 9/20 (45%)
C2H2 Zn finger 298..318 CDD:275368 7/19 (37%)
C2H2 Zn finger 326..347 CDD:275368 5/20 (25%)
C2H2 Zn finger 355..376 CDD:275368 5/20 (25%)
C2H2 Zn finger 384..404 CDD:275368 7/19 (37%)
C2H2 Zn finger 412..432 CDD:275368 5/19 (26%)
C2H2 Zn finger 440..460 CDD:275368 2/19 (11%)
C2H2 Zn finger 477..497 CDD:275368
C2H2 Zn finger 505..525 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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