DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4282 and LOC108645295

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_031757810.1 Gene:LOC108645295 / 108645295 -ID:- Length:587 Species:Xenopus tropicalis


Alignment Length:654 Identity:147/654 - (22%)
Similarity:212/654 - (32%) Gaps:216/654 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 SLQETKVALMEDDP--LTQETTSFP-EIIKLATQEEEGVTE-------PQE-----LGG--RNFF 125
            |.:.|...:...||  |.|...|.. |||.|.|.|...||:       ||.     |||  |:..
 Frog     4 SQEPTDPVMGNQDPDLLHQRILSLTLEIIYLLTGEGYTVTKKSGDGAPPQTCTDCMLGGACRHHV 68

  Fly   126 YPEIKIEEHELDTLPR---IEILERSAN--------------------TQENQDQLEGAARRLRK 167
            .|.:.........|.:   ..|||..:|                    :.|....|:|...|.|:
 Frog    69 TPTVGALHAPGSALQKENAKRILELISNIIQLLTGEVAIRCEDVSLYFSLEEWQYLKGNQTRYRE 133

  Fly   168 RLKAE------------DGSSVD----------KDKDEDGVEETAEPAPPKKRRGRPRKSDAAVA 210
            .:|..            |||:..          |:.|:.|.||           |.|...|.|..
 Frog   134 VIKENRQQLRPLGCAHGDGSASKPAVGADLCNAKEPDKTGAEE-----------GDPPNPDIAPT 187

  Fly   211 PPQKPKEDIQLDLKAE--ELDEFVDEETDPDFSCLVPSDNSSEDDGGSDGFDSDSDFELDNG-KQ 272
            .||.........:|.|  ..:|:.|.:.|           |..|.|||....|.|.....|| |:
 Frog   188 DPQTATNCFSHGIKEEPTSWEEYSDWKID-----------SLTDTGGSGPIGSLSAHNGPNGIKK 241

  Fly   273 EFAVLPKRTVVRPKKYKK----RTKP-------AEPKVRMSRELL---------EQRKKQQEEYD 317
            |.|         |.::.|    ..||       :||.....|..|         .||.|::.:..
 Frog   242 EAA---------PWEHGKCSNRNIKPLLDQIPGSEPLTDNMRSSLNNSLSAGYGSQRIKEEPDSW 297

  Fly   318 VIIAKFFTSVL--PC----------AIC-----------------NLLVHNFTEMQRHHRLTHQV 353
            .:.:.:..|.|  |.          ::|                 :|.|::.:.......:..:|
 Frog   298 EVYSDWTMSSLTEPVQADAAHRKGPSVCSSLSEHSGSNGETASWVSLSVNSLSGCTEGEPIPQKV 362

  Fly   354 ----DPGYMMCCGRKFTQR-----KVLAE--------HVLVHWNPDH------FKCSVCEKSFQN 395
                ||.    |....|.|     .::..        .:|....|..      :.||.|.|.|.:
 Frog   363 GGASDPK----CNPTGTPRTAPPIPIIGPSPKQQDGIRILTSTQPGAPKPKVIYTCSACGKPFTS 423

  Fly   396 SRHLESHQQVHMDPAVKLTFSCDLCSKTFLSKTAIDYHKLNKHVPKSEFKFTCSECNKKFLTERK 460
            .:|.|.||:||   ..:.||.|..|.|.|..::.:..|   ..:...:..|||:||.|.||.:..
 Frog   424 RKHCERHQRVH---TRETTFPCAECGKCFTQRSHLTAH---SRMHSGDNSFTCAECGKCFLFQSD 482

  Fly   461 LKNHMSSMHDPESTIICDKCGKQMRTKIILKKHQELMHSDKPRPEPELQQCQICGAWLKGMTGLK 525
            |..|:.: |..|....|.:|||.......||:|..:...:||.|.|:..:|.    |.:|     
 Frog   483 LNRHVIT-HTGEKPFSCAQCGKHFGHLYSLKRHLVIHSGNKPFPCPQCGKCY----WHQG----- 537

  Fly   526 QHMKSIHVESAGEHRCHICAKVSPNARALRRHIYHNHECERKFKCTMCEKAFKRPQELKEHTSTH 590
                                       .|.|||. .|..::.|.|..|.|.|...::|..|...|
 Frog   538 ---------------------------DLNRHIV-THSGQKPFSCAQCGKCFWVQRDLSRHVRGH 574

  Fly   591 TGEV 594
            |..:
 Frog   575 TDPI 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071 1/2 (50%)
FYDLN_acid <191..268 CDD:302856 18/78 (23%)
C2H2 Zn finger 330..351 CDD:275368 3/47 (6%)
C2H2 Zn finger 360..378 CDD:275368 4/30 (13%)
LIM 361..>400 CDD:295319 11/57 (19%)
C2H2 Zn finger 386..406 CDD:275368 9/19 (47%)
zf-C2H2_8 389..465 CDD:292531 25/75 (33%)
C2H2 Zn finger 417..438 CDD:275368 5/20 (25%)
C2H2 Zn finger 448..465 CDD:275368 7/16 (44%)
C2H2 Zn finger 477..498 CDD:275368 7/20 (35%)
C2H2 Zn finger 511..532 CDD:275368 3/20 (15%)
C2H2 Zn finger 541..562 CDD:275368 4/20 (20%)
C2H2 Zn finger 570..590 CDD:275368 6/19 (32%)
C2H2 Zn finger 598..619 CDD:275368
LOC108645295XP_031757810.1 KRAB_A-box 107..145 CDD:143639 6/37 (16%)
C2H2 Zn finger 414..434 CDD:275368 9/19 (47%)
zf-H2C2_2 426..451 CDD:404364 12/27 (44%)
zf-C2H2 440..462 CDD:395048 6/24 (25%)
C2H2 Zn finger 442..462 CDD:275368 5/22 (23%)
C2H2 Zn finger 470..490 CDD:275368 8/20 (40%)
zf-H2C2_2 482..507 CDD:404364 8/25 (32%)
C2H2 Zn finger 498..518 CDD:275368 7/19 (37%)
zf-H2C2_2 510..535 CDD:404364 8/28 (29%)
C2H2 Zn finger 526..546 CDD:275368 8/56 (14%)
zf-H2C2_2 538..562 CDD:404364 9/24 (38%)
C2H2 Zn finger 554..574 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.