DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4282 and LOC108183691

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_021331229.1 Gene:LOC108183691 / 108183691 -ID:- Length:420 Species:Danio rerio


Alignment Length:418 Identity:115/418 - (27%)
Similarity:173/418 - (41%) Gaps:52/418 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 KEDIQLDLKAEELDEFVDEETDP----DFSCLVPSDNSSEDDGGSDGFDSDSDFELDNGKQEFAV 276
            ||:.: |:|.||  .|..::.||    |...|      .|:..|.:..|....|   ...||...
Zfish     5 KEESE-DVKIEE--TFTVKQEDPQEKTDLMVL------KEETHGQNETDEKQQF---MKPQEIMT 57

  Fly   277 LPKRTVVRPKKYKKRTKPAEPKVRMSRELLEQRK--KQQEEYDVIIAKFFTSVLP--CAICNLLV 337
            ..|.|:.  ||.....:|.:.|...:....:.||  .|:...||.: :..|...|  |..|.   
Zfish    58 DEKPTLT--KKTSSHGRPWKSKSGCNFSCKQCRKSFSQKSNLDVHM-RVHTREQPFTCEQCG--- 116

  Fly   338 HNFTEMQ--RHHRLTHQVDPGYMMC--CGRKFTQRKVLAEHVLVHWNPDHFKCSVCEKSFQNSRH 398
            .:|.::|  :.|...|..:..: .|  ||:.|......|.|:.:|.....|.|..|.|||.:..:
Zfish   117 KSFGQIQGFKAHMRIHTGERKF-TCQECGKSFYHVGNFAAHMRIHTGEKPFSCKQCGKSFCHKPN 180

  Fly   399 LESHQQVHMDPAVKLTFSCDLCSKTFLSKTAIDYHKLNKHVPKSEFKFTCSECNKKFLTERKLKN 463
            |:.|.:||..   :..::|:.|.|:|..|.:.:.| :..|..|.  ..||.:|.|.:...|.|..
Zfish   181 LDVHMRVHTG---EKPYTCEQCGKSFGQKQSFNTH-MRIHTGKR--PCTCQQCGKSYYNARSLAA 239

  Fly   464 HMSSMHDPESTIICDKCGKQMRTKIILKKHQELMHSDKPRPEPELQQCQICGAWLKGMTGLKQHM 528
            ||.: |..|....|..|.|....|:.|..|..:...:||      ..|:.||........|..||
Zfish   240 HMRT-HTGERPFSCILCRKSFSLKLTLIAHMRVHTREKP------HTCEQCGKSFGQKQDLYIHM 297

  Fly   529 KSIHVESAGE--HRCHICAKVSPNARALRRHIYHNHECERKFKCTMCEKAFKRPQELKEHTSTHT 591
            : ||   .||  :.|..|.|..|:..:|:.|| ..|..|:.|.|..|.|:|.....||.|.:.||
Zfish   298 R-IH---TGEKPYTCTECGKSFPHISSLKHHI-RTHTGEKPFTCAQCGKSFTTKTSLKNHMNGHT 357

  Fly   592 GEVLYTCPNCPMTFFCSANMYKHRQRLH 619
            |.:::||..|..:......:.|| .::|
Zfish   358 GTIVFTCDQCGKSLTRKDYIKKH-MKIH 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071
FYDLN_acid <191..268 CDD:302856 15/55 (27%)
C2H2 Zn finger 330..351 CDD:275368 5/22 (23%)
C2H2 Zn finger 360..378 CDD:275368 6/19 (32%)
LIM 361..>400 CDD:295319 12/38 (32%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
zf-C2H2_8 389..465 CDD:292531 22/75 (29%)
C2H2 Zn finger 417..438 CDD:275368 6/20 (30%)
C2H2 Zn finger 448..465 CDD:275368 5/16 (31%)
C2H2 Zn finger 477..498 CDD:275368 6/20 (30%)
C2H2 Zn finger 511..532 CDD:275368 6/20 (30%)
C2H2 Zn finger 541..562 CDD:275368 7/20 (35%)
C2H2 Zn finger 570..590 CDD:275368 7/19 (37%)
C2H2 Zn finger 598..619 CDD:275368 4/20 (20%)
LOC108183691XP_021331229.1 COG5048 81..>406 CDD:227381 92/328 (28%)
C2H2 Zn finger 84..104 CDD:275368 5/20 (25%)
C2H2 Zn finger 112..132 CDD:275368 5/22 (23%)
C2H2 Zn finger 140..160 CDD:275368 6/19 (32%)
C2H2 Zn finger 168..188 CDD:275368 7/19 (37%)
C2H2 Zn finger 196..216 CDD:275368 6/20 (30%)
C2H2 Zn finger 224..244 CDD:275368 7/20 (35%)
C2H2 Zn finger 252..272 CDD:275368 6/19 (32%)
C2H2 Zn finger 280..300 CDD:275368 6/20 (30%)
C2H2 Zn finger 308..328 CDD:275368 7/20 (35%)
C2H2 Zn finger 336..356 CDD:275368 7/19 (37%)
C2H2 Zn finger 364..384 CDD:275368 4/20 (20%)
C2H2 Zn finger 392..412 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.