DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4282 and LOC108182721

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_021326715.1 Gene:LOC108182721 / 108182721 -ID:- Length:416 Species:Danio rerio


Alignment Length:369 Identity:102/369 - (27%)
Similarity:157/369 - (42%) Gaps:37/369 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   286 KKYKKRTKPAEPKVRMSRELLEQRKKQQEEYDVIIAKFFTSVLPCAICNLLVHNFTEMQRHHRLT 350
            |.|:: :|..|..|::       ..|...|.|.::.....:...|..|:..:.:.::::.|.|:.
Zfish    19 KDYEE-SKEEEHHVKI-------EDKTHLETDGVLKVRDKNCFTCTPCDKSLASKSKLKTHMRIH 75

  Fly   351 HQVDPGYMMCCGRKFTQRKVLAEHVLVHWNPDHFKCSVCEKSFQNSRHLESHQQVHMDPAVKLTF 415
            ....|.....||:.|:....|.:|:.:|.....|.|:.|.|||..|..|..|.::|..   :...
Zfish    76 TGEKPFTCTQCGKSFSHSSSLNQHMRIHTGEKPFTCTQCGKSFSKSSSLYKHMKIHTG---EKPL 137

  Fly   416 SCDLCSKTFLSKTAIDYHKLNKHVPKSEFKFTCSECNKKFLTERKLKNHMSSMHDPESTIICDKC 480
            :|..|.|:|...:.::.|   ..:...|...||.:|.|.|.....|..|| .:|..|....|.:|
Zfish   138 TCTHCGKSFNHSSFLNLH---MRIHTGEKPLTCPQCGKSFSKSSSLYKHM-KIHTGEKPFTCTQC 198

  Fly   481 GKQMRTKIILKKHQELMHSDKPRPEPELQQCQICGAWLKGMTGLKQHMKSIHVESAGE--HRCHI 543
            ||.......||||..:...:||      ..|..||......:.||:|| .||   .||  ..|..
Zfish   199 GKSFYDSSYLKKHMRIHTGEKP------FTCAQCGKSFNCSSHLKKHM-MIH---TGEKPFTCTQ 253

  Fly   544 CAKVSPNARALRRHIYHNHECERKFKCTMCEKAFKRPQELKEHTSTHTGEVLYTCPNCPMTFFCS 608
            |.|....:.:|.||: ..|..|:.|.||.|.|:|.....|.:|...||||..:|||.|..:|..|
Zfish   254 CGKSFSKSSSLYRHM-RIHTGEKPFTCTQCGKSFSHSSSLNQHIMIHTGEKPFTCPQCGKSFIHS 317

  Fly   609 ANMYKHRQRLHRAQYEADKNQPKPPNILKISRNASTQNKPKQEI 652
            :|:..| .|:|..:        ||....:..::.||.:..||.:
Zfish   318 SNLNLH-MRIHTGE--------KPFTCTQCGKSFSTSSHLKQHM 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071
FYDLN_acid <191..268 CDD:302856
C2H2 Zn finger 330..351 CDD:275368 4/20 (20%)
C2H2 Zn finger 360..378 CDD:275368 5/17 (29%)
LIM 361..>400 CDD:295319 13/38 (34%)
C2H2 Zn finger 386..406 CDD:275368 8/19 (42%)
zf-C2H2_8 389..465 CDD:292531 20/75 (27%)
C2H2 Zn finger 417..438 CDD:275368 5/20 (25%)
C2H2 Zn finger 448..465 CDD:275368 5/16 (31%)
C2H2 Zn finger 477..498 CDD:275368 8/20 (40%)
C2H2 Zn finger 511..532 CDD:275368 7/20 (35%)
C2H2 Zn finger 541..562 CDD:275368 6/20 (30%)
C2H2 Zn finger 570..590 CDD:275368 7/19 (37%)
C2H2 Zn finger 598..619 CDD:275368 8/20 (40%)
LOC108182721XP_021326715.1 COG5048 53..415 CDD:227381 94/327 (29%)
C2H2 Zn finger 55..75 CDD:275368 4/19 (21%)
C2H2 Zn finger 83..103 CDD:275368 5/19 (26%)
C2H2 Zn finger 111..131 CDD:275368 8/19 (42%)
C2H2 Zn finger 139..159 CDD:275368 5/22 (23%)
C2H2 Zn finger 167..187 CDD:275368 7/20 (35%)
C2H2 Zn finger 195..215 CDD:275368 8/19 (42%)
C2H2 Zn finger 223..243 CDD:275368 7/20 (35%)
C2H2 Zn finger 251..271 CDD:275368 6/20 (30%)
C2H2 Zn finger 279..299 CDD:275368 7/19 (37%)
C2H2 Zn finger 307..327 CDD:275368 8/20 (40%)
C2H2 Zn finger 335..355 CDD:275368 4/18 (22%)
C2H2 Zn finger 391..411 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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