DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4282 and Zfp78

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_017445447.1 Gene:Zfp78 / 103690110 RGDID:1586242 Length:638 Species:Rattus norvegicus


Alignment Length:581 Identity:139/581 - (23%)
Similarity:203/581 - (34%) Gaps:145/581 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 TQENQDQLEGAARRLRKRLKAED-------GSSVDKDKDEDGVEETAEPAPPKKRRGRPRKSDAA 208
            :||..:.|..|.|.|.:.:..|:       |:.:.|......:|...||...|   |:..:|   
  Rat    24 SQEEWEWLNPAQRSLYRNVVLENYRNLVSVGACISKPSLISLLEHGKEPWEVK---GQVTRS--- 82

  Fly   209 VAPPQKPKEDIQLDLKAEELD------EFVDEETDPDFSCLVPSDNSSEDDGGSDGFDSDS-DFE 266
               |.:..|.:|   |.:||.      :.|..|......|..|:  |.:.....|.||... ..|
  Rat    83 ---PVQGGESVQ---KTQELSLRQLAFDAVSVENIASLGCESPT--SGKKQKCKDLFDRQKMSQE 139

  Fly   267 LDNGKQEFAVLPKRTVVRPKKYK-----------------------KRTKPAEPKVRMSRELL-- 306
            :.|.|:  .|..|.|..:...||                       |::....||||..:::.  
  Rat   140 IFNLKE--TVTHKGTHTKEIGYKHTESFKSVHLDSVEENIYSHKTNKKSFSKNPKVRKYKKIWAG 202

  Fly   307 -------EQRKKQQEEYDVII-AKFFTSVLP--CAICNLLVHNFTEMQRHHRL-THQVDPGYMMC 360
                   |..|.......|.: .:..|...|  |.:|.........:.:||.. ||:   ....|
  Rat   203 KNIFKCNECEKTFTHSSSVTVHQRIHTGEKPYKCTVCGKAFKQSHHLAQHHTTHTHE---KLFEC 264

  Fly   361 --CGRKFTQRKVLAEHVLVHWNPDHFKCSVCEKSFQNSRHLESHQQVHMDPAVKLTFSCDLCSKT 423
              |.:.|:|...|..|..:|.....:||..|.|||:...||..||::|..   :..:.|..|.|.
  Rat   265 KECNKAFSQNSYLIVHQRIHTGEKPYKCKECTKSFRQPAHLAQHQRIHTG---EKPYKCKECGKA 326

  Fly   424 FLSKTAIDYHKLNKHVPKSEFKFTCSECNKKFLTERKLKNHMSSMHDPESTIICDKCGKQMRTKI 488
            |...:....|| ..|..|..|:  |:||.:.|.....|..|....|..|....|..|||.....|
  Rat   327 FRDSSTFAQHK-RCHNDKRPFQ--CAECGQAFRYNMSLTRHSRHYHTGEKPFDCADCGKVFSVHI 388

  Fly   489 ILKKHQELMHSDKPRPEPELQQCQICGAWLKGMTGLKQHMKSIHVESAGE--HRCHICAKVSPNA 551
            .|..|:.:...:||.|      |.:||...:..:.|..|.: ||   .||  ::|.||.|...::
  Rat   389 GLTLHRRIHTGEKPYP------CNVCGKAFRSGSSLTVHHR-IH---TGEKPYKCDICGKAFSHS 443

  Fly   552 RALRRH-------------------------IYH------------------------------N 561
            .:|..|                         :.|                              |
  Rat   444 MSLTGHQRVHSGEKPYTCKECGKAFRQSIHLVVHSRIHTGEKPYECKECGKAFRESSQLASHQRN 508

  Fly   562 HECERKFKCTMCEKAFKRPQELKEHTSTHTGEVLYTCPNCPMTFFCSANMYKHRQRLHRAQ 622
            |..|:.|:|..|.|.|||...|..|...||||..|.|..|..||..:|.:.:|: |:|..:
  Rat   509 HTGEKPFECKQCGKFFKRSTYLARHQKIHTGEKPYECNECGKTFTHTAYLIRHK-RVHTGE 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071
FYDLN_acid <191..268 CDD:302856 20/83 (24%)
C2H2 Zn finger 330..351 CDD:275368 4/21 (19%)
C2H2 Zn finger 360..378 CDD:275368 6/19 (32%)
LIM 361..>400 CDD:295319 13/38 (34%)
C2H2 Zn finger 386..406 CDD:275368 9/19 (47%)
zf-C2H2_8 389..465 CDD:292531 23/75 (31%)
C2H2 Zn finger 417..438 CDD:275368 6/20 (30%)
C2H2 Zn finger 448..465 CDD:275368 5/16 (31%)
C2H2 Zn finger 477..498 CDD:275368 7/20 (35%)
C2H2 Zn finger 511..532 CDD:275368 5/20 (25%)
C2H2 Zn finger 541..562 CDD:275368 7/75 (9%)
C2H2 Zn finger 570..590 CDD:275368 8/19 (42%)
C2H2 Zn finger 598..619 CDD:275368 7/20 (35%)
Zfp78XP_017445447.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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