DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4282 and LOC102551340

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_038955362.1 Gene:LOC102551340 / 102551340 RGDID:7697243 Length:948 Species:Rattus norvegicus


Alignment Length:361 Identity:93/361 - (25%)
Similarity:150/361 - (41%) Gaps:69/361 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 CAICNLLVHNFTEMQRHHRLTHQVDPGYMMCCGRKFTQRKVLAEHVLVHWNPDHFKCSVCEKSFQ 394
            |.:|....|..:.:.:|.|:.....|.....||:.|.....|::|.::|.....:||.||.|:|.
  Rat   220 CEVCGKAFHYPSILSKHKRIHTGEKPYKCEVCGKAFHISSFLSKHKIIHRGEKPYKCDVCGKAFH 284

  Fly   395 NSRHLESHQQVHMDPAVKLTFSCDLCSKTFLSKTAIDYHKLNKHVPKSEFKFTCSECNKKFLTER 459
            ....|.:|:::|   :.:..:.|::|.|.|...:.:..||: .|..::.:|  |..|.|.|....
  Rat   285 YPSRLSNHKKIH---SGEKPYKCEVCGKAFRILSLLSKHKI-IHTEENPYK--CEVCGKAFDYPS 343

  Fly   460 KLKNHMSSMHDPESTIICDKCGKQMRT----------------------------KIILKKHQEL 496
            :|..| |.||..|....|:.|||..|:                            .:.|.||:::
  Rat   344 RLSTH-SKMHTEEKPYKCEACGKAFRSLSSLSKHRRIHTGDNYYNSEVCGKAFIYPLRLSKHKKI 407

  Fly   497 MHSDKPRPEPELQQCQICGAWLKGMTGLKQHMKSIHVESAGE--HRCHICAKVSPNARALRRHIY 559
            ...:||      .:|::||........|.:| ::||   .||  ::|.:|.|.......|..| .
  Rat   408 CTGEKP------YKCEVCGKAFNDSLVLSKH-RAIH---TGEKLYKCDVCGKAFYYPSRLNNH-R 461

  Fly   560 HNHECERKFKCTMCEKAFKRPQELKEHTSTHTGEVLYTCPNCPMTFFCSANMYKHRQRLHRAQYE 624
            ..|..|:.::|..|.|||..|..|.:|...||||..|.|..|...|...:::.||| |:|..:  
  Rat   462 KIHSGEKPYQCEECGKAFCFPSSLSKHKRIHTGEKPYKCKECDKAFRSLSSLSKHR-RIHTGE-- 523

  Fly   625 ADKNQPKP------------PNILKISRNASTQNKP 648
                  ||            |::|...:...|:.||
  Rat   524 ------KPYKCEVCGKAFHYPSLLSKHKITHTEEKP 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071
FYDLN_acid <191..268 CDD:302856
C2H2 Zn finger 330..351 CDD:275368 5/20 (25%)
C2H2 Zn finger 360..378 CDD:275368 5/17 (29%)
LIM 361..>400 CDD:295319 12/38 (32%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
zf-C2H2_8 389..465 CDD:292531 19/75 (25%)
C2H2 Zn finger 417..438 CDD:275368 6/20 (30%)
C2H2 Zn finger 448..465 CDD:275368 5/16 (31%)
C2H2 Zn finger 477..498 CDD:275368 8/48 (17%)
C2H2 Zn finger 511..532 CDD:275368 5/20 (25%)
C2H2 Zn finger 541..562 CDD:275368 5/20 (25%)
C2H2 Zn finger 570..590 CDD:275368 8/19 (42%)
C2H2 Zn finger 598..619 CDD:275368 7/20 (35%)
LOC102551340XP_038955362.1 KRAB 2..60 CDD:214630
C2H2 Zn finger 108..128 CDD:275368
SFP1 <131..199 CDD:227516
C2H2 Zn finger 136..156 CDD:275368
C2H2 Zn finger 164..184 CDD:275368
C2H2 Zn finger 192..212 CDD:275368
COG5048 216..657 CDD:227381 93/361 (26%)
C2H2 Zn finger 220..240 CDD:275368 5/19 (26%)
C2H2 Zn finger 248..268 CDD:275368 5/19 (26%)
C2H2 Zn finger 276..296 CDD:275368 7/19 (37%)
C2H2 Zn finger 304..324 CDD:275368 6/20 (30%)
C2H2 Zn finger 332..352 CDD:275368 7/20 (35%)
C2H2 Zn finger 360..380 CDD:275368 5/19 (26%)
C2H2 Zn finger 389..408 CDD:275370 3/18 (17%)
C2H2 Zn finger 416..436 CDD:275368 5/20 (25%)
C2H2 Zn finger 444..464 CDD:275368 5/20 (25%)
COG5048 468..910 CDD:227381 28/95 (29%)
C2H2 Zn finger 472..492 CDD:275368 8/19 (42%)
C2H2 Zn finger 500..520 CDD:275368 7/20 (35%)
C2H2 Zn finger 528..548 CDD:275368 2/19 (11%)
C2H2 Zn finger 556..576 CDD:275368
C2H2 Zn finger 584..604 CDD:275368
C2H2 Zn finger 640..660 CDD:275368
C2H2 Zn finger 668..688 CDD:275368
C2H2 Zn finger 696..716 CDD:275368
C2H2 Zn finger 724..744 CDD:275368
C2H2 Zn finger 752..772 CDD:275368
C2H2 Zn finger 780..800 CDD:275368
C2H2 Zn finger 808..828 CDD:275368
C2H2 Zn finger 836..856 CDD:275368
C2H2 Zn finger 864..884 CDD:275368
C2H2 Zn finger 892..912 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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