DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4282 and LOC100536922

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_021322225.1 Gene:LOC100536922 / 100536922 -ID:- Length:1199 Species:Danio rerio


Alignment Length:307 Identity:90/307 - (29%)
Similarity:137/307 - (44%) Gaps:35/307 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 KFFTSVLPCAICNLLVHNFT--EMQRHHRLTHQVDPGYMMC-CGRKFTQRKVLAEHVLVHWNPDH 383
            |.||    |:.|.   .|||  |:...|...|..:..|... ||::|.||..|..|:.:|.....
Zfish   806 KPFT----CSECG---QNFTRKEILASHMRIHTGEKPYTCAHCGQRFRQRGNLTAHLRIHNGDKP 863

  Fly   384 FKCSVCEKSFQNSRHLESHQQVHMDPAVKLTFSCDLCSKTFLSKTAIDYHKLNKHV--PKSEFKF 446
            |.|:.||:||.....|.:|.:||..   :..|:|..|.::|..|     ..||.|:  ...:..|
Zfish   864 FACTQCEQSFTRKEILNAHIRVHTG---EKPFTCQQCGQSFTQK-----GNLNSHMRCHNGDKPF 920

  Fly   447 TCSECNKKFLTERKLKNHMSSMHDPESTIICDKCGKQMRTKIILKKHQELMHSDKPRPEPELQQC 511
            .||.|.:.|..:..|..|| .:|..|...:|.:||:..:.:..|:.|....:.:||      ..|
Zfish   921 ACSHCERSFSRKETLDGHM-RVHTGEKPFVCQQCGQSFKLQGNLRVHTRCHNGEKP------FAC 978

  Fly   512 QICGAWLKGMTGLKQHMKSIHVESAGE--HRCHICAKVSPNARALRRHIYHNHECERKFKCTMCE 574
            ..|.........|..|| |:|   .||  ..|..|.:.....|:||.|: .:|..|:.|.|.:||
Zfish   979 TQCERSFSRKETLDGHM-SVH---TGEKPFSCQQCGQSFKQKRSLRAHV-RDHSAEKPFSCELCE 1038

  Fly   575 KAFKRPQELKEHTSTHTGEVLYTCPNCPMTFFCSANMYKHRQRLHRA 621
            |:|.:.:.|:.|..:|||:..:.|..|..:.....|:::| .|:|.|
Zfish  1039 KSFSQKKCLETHLKSHTGDKPFICGQCGKSLKSKVNLFQH-MRIHSA 1084

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071
FYDLN_acid <191..268 CDD:302856
C2H2 Zn finger 330..351 CDD:275368 7/22 (32%)
C2H2 Zn finger 360..378 CDD:275368 7/18 (39%)
LIM 361..>400 CDD:295319 14/38 (37%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
zf-C2H2_8 389..465 CDD:292531 22/77 (29%)
C2H2 Zn finger 417..438 CDD:275368 6/20 (30%)
C2H2 Zn finger 448..465 CDD:275368 5/16 (31%)
C2H2 Zn finger 477..498 CDD:275368 5/20 (25%)
C2H2 Zn finger 511..532 CDD:275368 6/20 (30%)
C2H2 Zn finger 541..562 CDD:275368 6/20 (30%)
C2H2 Zn finger 570..590 CDD:275368 7/19 (37%)
C2H2 Zn finger 598..619 CDD:275368 5/20 (25%)
LOC100536922XP_021322225.1 C2H2 Zn finger 80..100 CDD:275368
C2H2 Zn finger 108..128 CDD:275368
C2H2 Zn finger 136..156 CDD:275368
zf-C2H2 162..184 CDD:306579
C2H2 Zn finger 164..184 CDD:275368
C2H2 Zn finger 192..212 CDD:275368
C2H2 Zn finger 220..240 CDD:275368
COG5048 243..642 CDD:227381
C2H2 Zn finger 248..268 CDD:275368
C2H2 Zn finger 276..296 CDD:275368
C2H2 Zn finger 304..324 CDD:275368
C2H2 Zn finger 332..352 CDD:275368
C2H2 Zn finger 474..494 CDD:275368
C2H2 Zn finger 502..522 CDD:275368
C2H2 Zn finger 530..550 CDD:275368
C2H2 Zn finger 558..578 CDD:275368
C2H2 Zn finger 586..606 CDD:275368
COG5048 610..1046 CDD:227381 78/266 (29%)
C2H2 Zn finger 614..634 CDD:275368
C2H2 Zn finger 642..662 CDD:275368
C2H2 Zn finger 670..690 CDD:275368
C2H2 Zn finger 698..718 CDD:275368
C2H2 Zn finger 726..746 CDD:275368
C2H2 Zn finger 754..774 CDD:275368
C2H2 Zn finger 782..802 CDD:275368
C2H2 Zn finger 810..830 CDD:275368 7/22 (32%)
C2H2 Zn finger 838..858 CDD:275368 7/19 (37%)
C2H2 Zn finger 866..886 CDD:275368 7/19 (37%)
C2H2 Zn finger 894..914 CDD:275368 7/24 (29%)
C2H2 Zn finger 922..942 CDD:275368 7/20 (35%)
C2H2 Zn finger 950..970 CDD:275368 5/19 (26%)
C2H2 Zn finger 978..998 CDD:275368 6/20 (30%)
C2H2 Zn finger 1006..1026 CDD:275368 6/20 (30%)
C2H2 Zn finger 1034..1054 CDD:275368 7/19 (37%)
C2H2 Zn finger 1062..1082 CDD:275368 5/20 (25%)
C2H2 Zn finger 1090..1110 CDD:275368
C2H2 Zn finger 1118..1138 CDD:275368
zf-H2C2_2 1131..1155 CDD:316026
C2H2 Zn finger 1146..1166 CDD:275368
C2H2 Zn finger 1174..1194 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.