DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4282 and zgc:174703

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_001191325.1 Gene:zgc:174703 / 100533191 ZFINID:ZDB-GENE-080208-4 Length:382 Species:Danio rerio


Alignment Length:411 Identity:98/411 - (23%)
Similarity:151/411 - (36%) Gaps:110/411 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 QKPKEDIQLD----LKAEELDEFVD-----EETDPDFSCLVPSDNSSEDDGGSDGFDSDSDFELD 268
            ::..||::::    :|.|:|.|..|     |||    .|     |..|:                
Zfish     5 KEESEDVKIEETFTVKQEDLQEQTDLMVLKEET----QC-----NKMEE---------------- 44

  Fly   269 NGKQEFAVLPKRTVVRPKKYKKRTKPAEPKVRMSRELLEQRKKQQEEYDVIIAKFFTSVLPCAIC 333
                              ::::.|...:|.:......|.:.:|.:.|                 |
Zfish    45 ------------------QHQEITADEKPTLTEKTSSLGRPRKSKTE-----------------C 74

  Fly   334 NLLVHNFTEMQRHHRLTHQVDPGYMMCCGRKFTQRKVLAEHVLVHWNPDHFKCSVCEKSFQNSRH 398
                 ||:..||.                :.|.|:..|..|:.||.....:.|..|.|||...|.
Zfish    75 -----NFSSKQRR----------------KSFIQKLNLGVHMRVHTREKPYTCEQCGKSFGKKRS 118

  Fly   399 LESHQQVHMDPAVKLTFSCDLCSKTFLSKTAIDYHKLNKHVPKSEFKFTCSECNKKFLTERKLKN 463
            |::|.::|..   :..::|..|.|:|.....:..|   ..:...|..:||.:|.|.|.....||.
Zfish   119 LKTHMRIHTG---ERPYTCQQCGKSFKQIGTLKGH---MRIHTGERPYTCQQCGKSFKQSATLKG 177

  Fly   464 HMSSMHDPESTIICDKCGKQMRTKIILKKHQELMHSDKPRPEPELQQCQICGAWLKGMTGLKQHM 528
            ||.| |..|....|.:||:..........|:.:...:||      ..||.||...|....||.||
Zfish   178 HMRS-HTGERPYTCQQCGQSFYYAGNFAAHKRIHTGEKP------YTCQQCGKSFKQSGTLKGHM 235

  Fly   529 KSIHVESAGEHRCHICAKVSPNARALRRHIYHNHECERKFKCTMCEKAFKRPQELKEHTSTHTGE 593
            :   :.:.|:.:   |.|.....:.|..|:..:.| |:.:.||.|.|:|.....|..|..|||.|
Zfish   236 R---IHNGGKTQ---CGKSFAQKQKLDTHMTIHTE-EKPYTCTECGKSFTCKSSLINHMKTHTRE 293

  Fly   594 VLYTCPNCPMTFFCSANMYKH 614
            .|:||..|..:|.|.||...|
Zfish   294 KLFTCNQCEKSFTCKANFMNH 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071
FYDLN_acid <191..268 CDD:302856 13/63 (21%)
C2H2 Zn finger 330..351 CDD:275368 5/20 (25%)
C2H2 Zn finger 360..378 CDD:275368 4/17 (24%)
LIM 361..>400 CDD:295319 12/38 (32%)
C2H2 Zn finger 386..406 CDD:275368 8/19 (42%)
zf-C2H2_8 389..465 CDD:292531 21/75 (28%)
C2H2 Zn finger 417..438 CDD:275368 5/20 (25%)
C2H2 Zn finger 448..465 CDD:275368 6/16 (38%)
C2H2 Zn finger 477..498 CDD:275368 4/20 (20%)
C2H2 Zn finger 511..532 CDD:275368 9/20 (45%)
C2H2 Zn finger 541..562 CDD:275368 4/20 (20%)
C2H2 Zn finger 570..590 CDD:275368 7/19 (37%)
C2H2 Zn finger 598..619 CDD:275368 7/17 (41%)
zgc:174703NP_001191325.1 zf-H2C2_2 90..113 CDD:290200 7/22 (32%)
C2H2 Zn finger 106..126 CDD:275368 8/19 (42%)
COG5048 <115..361 CDD:227381 64/220 (29%)
zf-H2C2_2 118..143 CDD:290200 7/27 (26%)
C2H2 Zn finger 134..154 CDD:275368 5/22 (23%)
zf-H2C2_2 147..171 CDD:290200 7/26 (27%)
C2H2 Zn finger 162..182 CDD:275368 9/20 (45%)
zf-H2C2_2 175..199 CDD:290200 10/24 (42%)
C2H2 Zn finger 190..210 CDD:275368 4/19 (21%)
zf-H2C2_2 202..227 CDD:290200 7/30 (23%)
C2H2 Zn finger 218..238 CDD:275368 9/22 (41%)
C2H2 Zn finger 243..262 CDD:275368 4/21 (19%)
zf-H2C2_2 255..279 CDD:290200 9/24 (38%)
C2H2 Zn finger 270..290 CDD:275368 7/19 (37%)
C2H2 Zn finger 298..315 CDD:275368 7/17 (41%)
C2H2 Zn finger 326..346 CDD:275368
C2H2 Zn finger 354..374 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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