DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4282 and znf532

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_002936713.2 Gene:znf532 / 100493656 XenbaseID:XB-GENE-491148 Length:1343 Species:Xenopus tropicalis


Alignment Length:906 Identity:172/906 - (18%)
Similarity:267/906 - (29%) Gaps:308/906 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 QLEVTTIV-----NQHFPVQISKE--SDERICGRCWKIV-------------------------- 62
            :|...||:     ||..|:..::|  .||:|     ::|                          
 Frog   152 KLHTDTILKASSFNQFSPISSAEEFDEDEKI-----EVVDPPDREALKSSFSSNILDESGVEQVY 211

  Fly    63 -SD-FHTLHEFVSA--AQSSLQETKVALMEDDPLTQETTSF-----------PEIIK-------L 105
             || .|:...|:.|  |....|:...:...|  |...:|:|           .|.:|       |
 Frog   212 ESDKMHSGDHFIKAGTALPGSQDKNKSSKRD--LEASSTNFSVYDTFKLQKLDEKLKESAQRLLL 274

  Fly   106 ATQEEEGV-TEPQELGGRNFFYPEIKIEEHELDTLPRIEILERSANTQENQDQLEGAARRLRKRL 169
            .|:|:|.: ||..|..|........|........:..|..|.......:.:| ||.::......|
 Frog   275 ETKEDEKIDTEKSEANGGTISQLRAKSSAKLSSCIAAIAALSAKKTVCDLKD-LEPSSGGASPVL 338

  Fly   170 KAEDGS--SVDKDKDE--------DGVEETAEPAPPKKR--------RGRPRKSDAAVAPPQKPK 216
            |..|.|  |.||..|.        ||.::.........|        :|.|..|..:.  |..||
 Frog   339 KEGDCSPMSADKSPDSQLTVQSLIDGTKKVQAKQSDSPRSVLSETSSKGSPSSSGGST--PAIPK 401

  Fly   217 EDIQL-----------------DLKAEELDEFVDEETDPDFSCLVPSDNS--------------- 249
            ..|:.                 |...|||.:.|:..:....|.|:||.:|               
 Frog   402 VRIKTIKTSSGEIKRMVTRVLPDFDVEELKKNVEPNSPVLVSSLLPSPSSTPVLSSPTRASLHPS 466

  Fly   250 ------SED----------------------DGGSDGFD----------------------SDSD 264
                  |.|                      ..||...:                      |.:.
 Frog   467 IGSPVASTDVAPKQVTIKPVATAFLPVSAVKTAGSQVINLKFGNNTTVKATVISAASVQSASSAI 531

  Fly   265 FELDNG-KQEFAVLPKRTVVRPKKYKKRTKPAE----PKVRMSRELLE-QRKKQQEEYDVIIAKF 323
            .:..|. :|:..|:|..::...|...|....|.    |:...:.||.: ..|.||:....::|..
 Frog   532 IKAANAIQQQTVVVPASSLANTKLVPKTVHFANLNLLPQGSQTSELRQVLAKPQQQIKQALVAAA 596

  Fly   324 FTSVLPCAICNLLV---HNFTEMQRHHRLTHQVDP---------------------GYMMC--CG 362
            ..|..|..:..:.|   ...:.::..:::...|:|                     || .|  ||
 Frog   597 TPSTPPKKVSRVQVVASSQSSVVEAFNKVLSSVNPLPVYVPNLTPPASAGITLPTRGY-KCLECG 660

  Fly   363 RKFTQRKVLAEHVLVHWNPDHFKCSVCEKS--FQNSRHLESHQQVHMDPAVKLTFSCDLCSKTFL 425
            ..|...|.|.:|...........|:.|.|:  |.|...|.||.:.|.:..|.:.     ||...|
 Frog   661 DAFALEKSLLQHYDRRSVRIEVTCNHCSKNLVFYNKCSLLSHARGHKEKGVVMQ-----CSHLIL 720

  Fly   426 -------------------------SKTAIDYHKLNK--------------------HVPKSE-- 443
                                     :..|:..|.:.|                    .:|..|  
 Frog   721 KPVPTDQMIVASQNNASTTPLATRQTPVAVVAHTVTKIQPGLPGPVISAPSNTPVAPAMPLDEDP 785

  Fly   444 -----FKFTCSECNKKFLTERKLKNHMSSMHDPESTIICDKCGKQMRTKIILKKHQELMHSDKPR 503
                 ....|.||::.|..|..|..|.....|..:...|..|...:........||.:.....|.
 Frog   786 ANLCRHSLKCLECSEVFQDEIALATHYQQASDATAQKTCSICMMLLPNPCSYNCHQRIHQHKSPY 850

  Fly   504 PEPEL-------------------------QQCQICGAWLKGMTGLKQHMKSIHVESAGEHRCHI 543
            ..||.                         .:|..|......::.||.|::..|.|..  ::|.|
 Frog   851 TCPECGAICRSVHFQTHVTKNCLHYTRRVGYRCLHCSVVYSELSALKCHIQGSHCEVF--YKCPI 913

  Fly   544 CAKVSPNARALRRHIYHNH------ECERKFKCTMCEKAFKRPQELKEHTSTHTGE---VLYTCP 599
            |.....:|.:...|.|..|      |.:..:||:||:..|.....|..|...|...   .::.||
 Frog   914 CPMAFKSAPSTHSHAYTQHPGVKIGEPKIIYKCSMCDTVFTLQPLLHRHFDQHLENQKVSVFKCP 978

  Fly   600 NCPMTFFCSANMYKHRQRLHRAQYEADKNQPKPPNI---LKISRNASTQN-------KPKQ 650
            :|.:.:.....|..|.:.:|...    |:...||.:   |.:|...:|||       .|||
 Frog   979 DCSLLYAQKQLMMDHIKSMHGTL----KSIEGPPKLGVNLPLSTKPTTQNATSSSKEDPKQ 1035

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071 17/86 (20%)
FYDLN_acid <191..268 CDD:302856 23/166 (14%)
C2H2 Zn finger 330..351 CDD:275368 1/23 (4%)
C2H2 Zn finger 360..378 CDD:275368 7/19 (37%)
LIM 361..>400 CDD:295319 11/40 (28%)
C2H2 Zn finger 386..406 CDD:275368 8/21 (38%)
zf-C2H2_8 389..465 CDD:292531 23/129 (18%)
C2H2 Zn finger 417..438 CDD:275368 6/65 (9%)
C2H2 Zn finger 448..465 CDD:275368 6/16 (38%)
C2H2 Zn finger 477..498 CDD:275368 4/20 (20%)
C2H2 Zn finger 511..532 CDD:275368 5/20 (25%)
C2H2 Zn finger 541..562 CDD:275368 6/20 (30%)
C2H2 Zn finger 570..590 CDD:275368 6/19 (32%)
C2H2 Zn finger 598..619 CDD:275368 5/20 (25%)
znf532XP_002936713.2 C2H2 Zn finger 795..821 CDD:275368 8/25 (32%)
C2H2 Zn finger 824..844 CDD:275368 4/19 (21%)
C2H2 Zn finger 852..874 CDD:275368 2/21 (10%)
C2H2 Zn finger 883..900 CDD:275368 4/16 (25%)
C2H2 Zn finger 911..932 CDD:275368 6/20 (30%)
C2H2 Zn finger 946..966 CDD:275368 6/19 (32%)
C2H2 Zn finger 1068..1088 CDD:275368
C2H2 Zn finger 1098..1119 CDD:275368
C2H2 Zn finger 1128..1148 CDD:275368
C2H2 Zn finger 1218..1238 CDD:275368
zf-C2H2_11 1241..1269 CDD:406917
C2H2 Zn finger 1247..1268 CDD:275368
C2H2 Zn finger 1308..1328 CDD:275368
zf-C2H2_6 1308..1328 CDD:404748
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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