DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4282 and znf319

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_002931702.1 Gene:znf319 / 100491476 XenbaseID:XB-GENE-963553 Length:570 Species:Xenopus tropicalis


Alignment Length:370 Identity:97/370 - (26%)
Similarity:141/370 - (38%) Gaps:63/370 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   294 PAEPKVRMSRELLEQRKKQQEEYDVIIAKFFTSVLPCAICNLLVHNFTEMQRHHRLTHQVDPGYM 358
            ||.|           .:..||.:|    |.|.    |.:|.....:.:|:.||.|:.....|...
 Frog   185 PAPP-----------AQSAQESHD----KPFC----CTLCQKPFKHLSELSRHERVHTGEKPYKC 230

  Fly   359 MCCGRKFTQRKVLAEHVLVHWNPDHFKCSVCEKSFQNSRHLESHQQVHMDPAVKLTFSCDLCSKT 423
            ..|.:.|:|...|..|...|.:...:||:||:|||::..||..|...|   |.:..|.|..|...
 Frog   231 TLCDKSFSQSSHLVHHKRTHSSERPYKCTVCDKSFKHRSHLLRHMYAH---AGEQLFQCQTCQLR 292

  Fly   424 FLSKTAIDYHKLNKHVPKSEFKFTCSECNKKFLTERKLKNHMSSMHDPESTIICDKCGKQMRTKI 488
            |...:.:..|..   .|..|..|.||.|.|.|.....|:.| ...|..|....||.|....:.:.
 Frog   293 FKESSQLLQHPC---TPAGERPFRCSACQKTFRRPSDLRQH-ERTHSEERPFHCDLCQMSFKQQY 353

  Fly   489 ILKKHQELMHSDKPRPEPELQQCQICGAWLKGMTGLKQHMKSIHVESAGEHRCHICAKVSPNARA 553
            .|.:|:.....:.|      .:|.:|...:...:.|..|...  .||.  .:|:.|.:....::.
 Frog   354 ALMRHRRTHKVEDP------SKCTLCDKTMVQPSQLLFHQHG--AESI--FKCNACQRGFSQSQE 408

  Fly   554 LRRHIYHNHECERKFKCTMCEKAFKRPQELKEHTSTHTGEVLYTCPNCPMTFFCSANMYKHRQRL 618
            |.||.......:|.|:|::|.||:||...|::|.:||..|....|..|...||.|:...:||   
 Frog   409 LLRHKCGQSSADRPFQCSVCHKAYKRSSALQKHQTTHCAEKPLRCTGCERRFFSSSEFVQHR--- 470

  Fly   619 HRAQYEADKNQPKPPNILKIS---------------RNASTQNKP 648
                  .|..:.||   ||.|               |...|..||
 Frog   471 ------CDPAREKP---LKCSDCEKRFKYASDLQRHRRVHTGEKP 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071
FYDLN_acid <191..268 CDD:302856
C2H2 Zn finger 330..351 CDD:275368 6/20 (30%)
C2H2 Zn finger 360..378 CDD:275368 5/17 (29%)
LIM 361..>400 CDD:295319 14/38 (37%)
C2H2 Zn finger 386..406 CDD:275368 9/19 (47%)
zf-C2H2_8 389..465 CDD:292531 23/75 (31%)
C2H2 Zn finger 417..438 CDD:275368 4/20 (20%)
C2H2 Zn finger 448..465 CDD:275368 6/16 (38%)
C2H2 Zn finger 477..498 CDD:275368 5/20 (25%)
C2H2 Zn finger 511..532 CDD:275368 4/20 (20%)
C2H2 Zn finger 541..562 CDD:275368 5/20 (25%)
C2H2 Zn finger 570..590 CDD:275368 8/19 (42%)
C2H2 Zn finger 598..619 CDD:275368 7/20 (35%)
znf319XP_002931702.1 C2H2 Zn finger 75..97 CDD:275368
C2H2 Zn finger 105..125 CDD:275368
C2H2 Zn finger 133..153 CDD:275368
COG5048 <197..352 CDD:227381 48/169 (28%)
C2H2 Zn finger 202..222 CDD:275368 6/19 (32%)
C2H2 Zn finger 230..250 CDD:275368 5/19 (26%)
C2H2 Zn finger 258..278 CDD:275368 9/19 (47%)
C2H2 Zn finger 286..306 CDD:275368 4/22 (18%)
C2H2 Zn finger 314..334 CDD:275368 7/20 (35%)
C2H2 Zn finger 342..362 CDD:275368 5/19 (26%)
C2H2 Zn finger 370..388 CDD:275368 4/17 (24%)
C2H2 Zn finger 396..416 CDD:275368 5/19 (26%)
SFP1 <421..498 CDD:227516 26/88 (30%)
C2H2 Zn finger 425..445 CDD:275368 8/19 (42%)
C2H2 Zn finger 453..473 CDD:275368 7/28 (25%)
C2H2 Zn finger 481..501 CDD:275368 2/19 (11%)
zf-H2C2_2 493..518 CDD:372612 4/14 (29%)
C2H2 Zn finger 509..529 CDD:275368
C2H2 Zn finger 537..557 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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