DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4282 and znf665

DIOPT Version :10

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_001165008.1 Gene:znf665 / 100328608 XenbaseID:XB-GENE-6050027 Length:403 Species:Xenopus tropicalis


Alignment Length:284 Identity:95/284 - (33%)
Similarity:139/284 - (48%) Gaps:28/284 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 QRH----HRLTHQVDPGYMMC--CGRKFTQRKVLAEHVLVHWNPDHFKCSVCEKSFQNSRHLESH 402
            |:|    |:|.|..:..: ||  ||:.|.|:::|.:|.|:|.....:.|:.|:|.|...|.|.||
 Frog   139 QKHRLTAHQLIHMGEKPF-MCTECGKSFRQKQLLTQHQLIHTGEKPYACTECDKQFHKRRSLLSH 202

  Fly   403 QQVHMDPAVKLTFSCDLCSKTFLSKTAIDYHKLNKHVPKSEFKFTCSECNKKFLTERKLKNHMSS 467
            |::|  ..|| .|.|..|.|:|.:||   |.:.::.:...|..|:|:||.|..:|:.:|.||. .
 Frog   203 QRIH--TGVK-PFVCMECGKSFSNKT---YFQRHQRIHTGEKLFSCTECGKCLITKSQLGNHY-K 260

  Fly   468 MHDPESTIICDKCGKQMRTKIILKKHQELMHSDKPRPEPELQQCQICGAWLKGMTGLKQHMKSIH 532
            :|..|....|.:|||:..||..|..|.::...:||      ..|..||   |..| .|..:.|.:
 Frog   261 VHTGEKPFSCTECGKRFTTKTKLGSHYKVHTGEKP------FFCTECG---KSFT-TKSQLNSHY 315

  Fly   533 VESAGE--HRCHICAKVSPNARALRRHIYHNHECERKFKCTMCEKAFKRPQELKEHTSTHTGEVL 595
            ....||  ..|..|.|.......|..| |..|..|:.|.||.|.|:|....:|..|.:.||||..
 Frog   316 TVHTGEKPFSCTECCKSFTTKSQLNSH-YTVHTGEKPFSCTECGKSFTTKAKLNSHYTVHTGEKP 379

  Fly   596 YTCPNCPMTFFCSANMYKHRQRLH 619
            ::|..|..:|..:.|:.|| ||:|
 Frog   380 FSCTECGKSFVSNGNLTKH-QRIH 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..82 CDD:462262
PLN03237 <81..239 CDD:215641
C2H2 Zn finger 330..351 CDD:275368 4/10 (40%)
C2H2 Zn finger 360..378 CDD:275368 8/19 (42%)
LIM 361..>400 CDD:413332 13/38 (34%)
C2H2 Zn finger 386..406 CDD:275368 9/19 (47%)
C2H2 Zn finger 417..438 CDD:275368 7/20 (35%)
C2H2 Zn finger 448..465 CDD:275368 7/16 (44%)
C2H2 Zn finger 477..498 CDD:275368 8/20 (40%)
C2H2 Zn finger 511..532 CDD:275368 7/20 (35%)
C2H2 Zn finger 541..562 CDD:275368 6/20 (30%)
C2H2 Zn finger 570..590 CDD:275368 7/19 (37%)
C2H2 Zn finger 598..619 CDD:275368 8/20 (40%)
znf665NP_001165008.1 COG5048 15..392 CDD:227381 89/271 (33%)
C2H2 Zn finger 18..38 CDD:275368
C2H2 Zn finger 46..66 CDD:275368
C2H2 Zn finger 74..94 CDD:275368
C2H2 Zn finger 102..122 CDD:275368
C2H2 Zn finger 130..150 CDD:275368 4/10 (40%)
C2H2 Zn finger 158..178 CDD:275368 8/19 (42%)
C2H2 Zn finger 186..206 CDD:275368 9/19 (47%)
C2H2 Zn finger 214..234 CDD:275368 7/22 (32%)
C2H2 Zn finger 242..262 CDD:275368 8/20 (40%)
C2H2 Zn finger 270..290 CDD:275368 8/19 (42%)
C2H2 Zn finger 298..318 CDD:275368 7/23 (30%)
C2H2 Zn finger 326..346 CDD:275368 6/20 (30%)
C2H2 Zn finger 354..374 CDD:275368 7/19 (37%)
C2H2 Zn finger 382..402 CDD:275368 8/20 (40%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.