DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4282 and zbtb20

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_017946862.1 Gene:zbtb20 / 100302397 XenbaseID:XB-GENE-993556 Length:751 Species:Xenopus tropicalis


Alignment Length:668 Identity:124/668 - (18%)
Similarity:221/668 - (33%) Gaps:168/668 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 DYIDVHSARGDQLEVTTIVNQHFPVQISKESDERICGRCWKIVSDFHTLHEFVSAAQSSLQETKV 84
            :|:..|.    |..|..|.:..:...:...|.||                .|.|.|..|..:|.:
 Frog   157 NYLQSHR----QHSVDRIYSALYTCSMHNGSGER----------------SFYSGALVSHHKTAL 201

  Fly    85 AL-----MEDD-----------------PLTQETT---SFPEIIKLATQEEEGVTEPQELGGRNF 124
            .|     ||:.                 ..|.|||   ..|..:::           |.|.|...
 Frog   202 GLPRQHHMEEPSWITRIHQRSQRMERYLSATPETTHCRKQPRPVRI-----------QTLMGNIH 255

  Fly   125 FYPEIKIEEHELDTLPRIEILERSANTQ--ENQDQLEGAARRLRKRLKAEDGSSVDKDKDEDGVE 187
            ...|:: ::::.......:.|||:.:.:  |:.||.||.... .|....:.|.|.....:.|..|
 Frog   256 IKQEVE-DDYDYYGQQSSQALERNESEECTEDTDQAEGTESE-PKGESFDSGVSSSIGTEPDSGE 318

  Fly   188 ETAEPAPPKKRRGRPRKSDAAVAPPQKPKEDIQLDLKAEELDEFVDEETDPDFSCLVPSDNSSED 252
            :  :..|...|.|           ||:|.:       ||..:...:...:.|...|..|.:|.|.
 Frog   319 Q--QYMPILSREG-----------PQEPSQ-------AESNNLPTEGSENQDQPHLETSSSSPER 363

  Fly   253 DGGSDGFDSDSDF-----ELDNGKQEFAVLPK--RTVVRPKKYKKRTKPAEPKVRMSRELLEQRK 310
            :     .|:||..     ..|.|..:.:|...  :|:...:.|.::|:.....:||...|....:
 Frog   364 N-----LDTDSTVLRVSNSTDKGVVQTSVTQSIAQTMPNTQLYLRQTETLTSNLRMPLTLTSNTQ 423

  Fly   311 KQQEEYDVIIAKFFTS------------VLPCAICNLLVHNFT-----------EMQRHHRLTHQ 352
            ......:..:...||:            .||.:|........|           :.|...:.:|.
 Frog   424 VIGTAGNTYLPTLFTTQAAGSGPKPFLFSLPQSIPGQQTQFVTVPQSGISPFAGQYQNTSQTSHS 488

  Fly   353 VD-------PGYMMCCGRKFTQRKVLAEHVLVHWNPDHFKCSVCEKSFQNSRHLESHQQVHMDPA 410
            ..       |.....|.:.||.::...:|:.||......:||:|.:||....:|..|...|  ..
 Frog   489 TSSAQGEKKPYECTLCNKTFTAKQNYVKHMFVHTGEKPHQCSICWRSFSLKDYLIKHMVTH--TG 551

  Fly   411 VKLTFSCDLCSKTFLSKTAIDYHKLNKHVPKSEFKFTCSECNKKFLTERKLKNHMSSMHD----- 470
            |: .:.|.:|:|.|..|::::.| :..|  :.|..:.|..|.|||..:..|:.|: ::|.     
 Frog   552 VR-AYQCSICNKRFTQKSSLNVH-MRLH--RGEKSYECYICKKKFSHKTLLERHV-ALHSATNGT 611

  Fly   471 --------PESTIICDKCGKQMRTKII--LKKHQELMHSDKPRPEPELQQCQI---------CGA 516
                    |..::......:.:.:..|  ....|.|..:....|.|.|...|:         ..|
 Frog   612 ASLPITAAPPGSVPAPGSAQPLGSAPISGTTPGQGLPPTPNMAPTPVLANAQVLPAAPVLAPASA 676

  Fly   517 WLKG---MTGLKQHMKSIHVESAGEHRCHICAKVSPN---ARALRRHIYHNHECERKFKCTMCEK 575
            .::.   ::.|......:|..:.......:.|...||   |.......|         .|::|..
 Frog   677 LVQAPVLVSALAPTPNLVHPPTPSPTPGPVLAPRPPNGGVATGAEGTTY---------VCSVCPT 732

  Fly   576 AFKRPQELKEHTSTHTGE 593
            .|.:.::..:|...|..:
 Frog   733 KFDQIEQFNDHMRMHVSD 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071 12/60 (20%)
FYDLN_acid <191..268 CDD:302856 16/81 (20%)
C2H2 Zn finger 330..351 CDD:275368 3/31 (10%)
C2H2 Zn finger 360..378 CDD:275368 4/17 (24%)
LIM 361..>400 CDD:295319 11/38 (29%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
zf-C2H2_8 389..465 CDD:292531 21/75 (28%)
C2H2 Zn finger 417..438 CDD:275368 6/20 (30%)
C2H2 Zn finger 448..465 CDD:275368 6/16 (38%)
C2H2 Zn finger 477..498 CDD:275368 3/22 (14%)
C2H2 Zn finger 511..532 CDD:275368 3/32 (9%)
C2H2 Zn finger 541..562 CDD:275368 5/23 (22%)
C2H2 Zn finger 570..590 CDD:275368 4/19 (21%)
C2H2 Zn finger 598..619 CDD:275368
zbtb20XP_017946862.1 BTB_POZ_ZBTB20_DPZF 6..122 CDD:349517
SEEEED 272..369 CDD:373302 27/122 (22%)
zf-C2H2 499..521 CDD:333835 4/21 (19%)
C2H2 Zn finger 501..521 CDD:275368 4/19 (21%)
zf-C2H2 527..549 CDD:333835 7/21 (33%)
C2H2 Zn finger 529..549 CDD:275368 7/19 (37%)
zf-H2C2_2 541..566 CDD:372612 8/27 (30%)
zf-C2H2 555..577 CDD:333835 6/22 (27%)
C2H2 Zn finger 557..577 CDD:275368 6/20 (30%)
zf-H2C2_2 569..594 CDD:372612 8/27 (30%)
C2H2 Zn finger 585..605 CDD:275368 7/20 (35%)
PRK14959 <606..>691 CDD:184923 10/84 (12%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.