DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4282 and si:ch211-202h22.10

DIOPT Version :9

Sequence 1:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_017212100.2 Gene:si:ch211-202h22.10 / 100002322 ZFINID:ZDB-GENE-110914-121 Length:519 Species:Danio rerio


Alignment Length:297 Identity:91/297 - (30%)
Similarity:141/297 - (47%) Gaps:25/297 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 CAICNLLVHNFTEMQ--RHHRLTHQVDPGYMMC--CGRKFTQRKVLAEHVLVHWNPDHFKCSVCE 390
            |::|.:   :||..|  :.|.|.|..:..| :|  ||:.|:.::.|..|:.:|.....|.|:.|.
Zfish   180 CSLCEM---SFTHQQSLKRHMLIHVGEKPY-VCRQCGKSFSVKQSLESHIRIHTGEKPFACAECG 240

  Fly   391 KSFQNSRHLESHQQVHMDPAVKLTFSCDLCSKTFLSKTAIDYHKLNKHVPKSEFKFTCSECNKKF 455
            |.|...::||||.:||  ..|| .|||..|.|.|..|.:::.|..   :...|..||||.|:|.|
Zfish   241 KGFAVKQNLESHMRVH--TGVK-PFSCPQCGKRFTVKQSLESHMT---IHTGERPFTCSMCDKTF 299

  Fly   456 LTERKLKNHMSSMHDPESTIICDKCGKQMRTKIILKKHQELMHSDKPRPEPELQQCQICGAWLKG 520
            ..:.||:.||.: |..|...||.:||.....:..|::|..:...:||      ..|..|......
Zfish   300 TVKHKLEYHMRN-HTGEKPYICPQCGNSYALRNHLERHVRIHTGEKP------FSCSKCAKRFTM 357

  Fly   521 MTGLKQHMKSIHVESAGEHRCHICAKVSPNARALRRHIYHNHECERKFKCTMCEKAFKRPQELKE 585
            ...||.||: :| .....:.|..|.|.....::|..|: ..|..|:.|.||.|.|::...|.|:.
Zfish   358 KQSLKSHMR-VH-NRTKPYICSQCGKRFTVKQSLESHM-SLHTGEKPFTCTECGKSYTLRQSLET 419

  Fly   586 HTSTHTGEVLYTCPNCPMTFFCSANMYKHRQRLHRAQ 622
            |...|||:..::|.:|..:|....|::.| .|:|..:
Zfish   420 HMRVHTGDKCFSCSDCGRSFTVKQNLHVH-MRVHTGE 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4282NP_611118.3 zf-AD 7..81 CDD:285071
FYDLN_acid <191..268 CDD:302856
C2H2 Zn finger 330..351 CDD:275368 7/22 (32%)
C2H2 Zn finger 360..378 CDD:275368 6/19 (32%)
LIM 361..>400 CDD:295319 11/38 (29%)
C2H2 Zn finger 386..406 CDD:275368 8/19 (42%)
zf-C2H2_8 389..465 CDD:292531 29/75 (39%)
C2H2 Zn finger 417..438 CDD:275368 6/20 (30%)
C2H2 Zn finger 448..465 CDD:275368 7/16 (44%)
C2H2 Zn finger 477..498 CDD:275368 5/20 (25%)
C2H2 Zn finger 511..532 CDD:275368 6/20 (30%)
C2H2 Zn finger 541..562 CDD:275368 5/20 (25%)
C2H2 Zn finger 570..590 CDD:275368 7/19 (37%)
C2H2 Zn finger 598..619 CDD:275368 6/20 (30%)
si:ch211-202h22.10XP_017212100.2 C2H2 Zn finger 12..32 CDD:275368
COG5048 36..439 CDD:227381 86/278 (31%)
C2H2 Zn finger 40..60 CDD:275368
C2H2 Zn finger 68..88 CDD:275368
C2H2 Zn finger 96..116 CDD:275368
C2H2 Zn finger 124..144 CDD:275368
C2H2 Zn finger 152..172 CDD:275368
C2H2 Zn finger 180..200 CDD:275368 7/22 (32%)
C2H2 Zn finger 208..228 CDD:275368 6/19 (32%)
C2H2 Zn finger 236..256 CDD:275368 8/19 (42%)
C2H2 Zn finger 264..284 CDD:275368 6/22 (27%)
C2H2 Zn finger 292..312 CDD:275368 9/20 (45%)
C2H2 Zn finger 320..340 CDD:275368 5/19 (26%)
C2H2 Zn finger 348..368 CDD:275368 6/20 (30%)
C2H2 Zn finger 376..396 CDD:275368 5/20 (25%)
C2H2 Zn finger 404..424 CDD:275368 7/19 (37%)
C2H2 Zn finger 432..452 CDD:275368 6/20 (30%)
zf-H2C2_2 448..469 CDD:316026 3/9 (33%)
C2H2 Zn finger 460..480 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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