DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8060 and AT5G16040

DIOPT Version :10

Sequence 1:NP_611117.2 Gene:CG8060 / 36824 FlyBaseID:FBgn0034113 Length:1189 Species:Drosophila melanogaster
Sequence 2:NP_197108.1 Gene:AT5G16040 / 831461 AraportID:AT5G16040 Length:396 Species:Arabidopsis thaliana


Alignment Length:136 Identity:42/136 - (30%)
Similarity:67/136 - (49%) Gaps:13/136 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 DLATDSQNDVLVWGSNKNYNLGIGNEQNTNTP---QAVDFFRKSNLWLEQVALGAYHSLFCDKKG 200
            :||......:..||:|:...||.|:.|..:.|   |.:|     :|.|..:|.|.:||.....:|
plant   208 NLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLD-----DLTLVDIAAGGWHSTALTNEG 267

  Fly   201 HLYAVGHGKGGRLGIG--LENSLPAPKRVKVSSKLSGDSIQCISVSRQHSLVLTHQSLVFACGLN 263
            .:|..|.|:.||||.|  .::|...|::|.:   |:|:.|..:|....||:.||....:|:.|..
plant   268 EVYGWGRGEHGRLGFGDNDKSSKMLPQKVNL---LAGEDIIQVSCGGTHSVALTRDGRIFSFGRG 329

  Fly   264 TDHQLG 269
            ...:||
plant   330 DHGRLG 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8060NP_611117.2 ANKYR <51..141 CDD:440430 0/1 (0%)
ANK repeat 56..87 CDD:293786
ANK repeat 89..121 CDD:293786
ATS1 140..>355 CDD:444065 42/135 (31%)
BTB_POZ 543..643 CDD:453885
BTB2_POZ_IBtk 691..802 CDD:349611
BACK_IBtk 798..857 CDD:350575
AT5G16040NP_197108.1 ATS1 6..345 CDD:444065 42/136 (31%)
RCC1 320..385 CDD:395335 4/16 (25%)
Blue background indicates that the domain is not in the aligned region.

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