DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8060 and RCBTB1

DIOPT Version :9

Sequence 1:NP_611117.2 Gene:CG8060 / 36824 FlyBaseID:FBgn0034113 Length:1189 Species:Drosophila melanogaster
Sequence 2:NP_001339429.1 Gene:RCBTB1 / 55213 HGNCID:18243 Length:531 Species:Homo sapiens


Alignment Length:722 Identity:148/722 - (20%)
Similarity:228/722 - (31%) Gaps:257/722 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 TDSQNDVLVWGSNKNYNLGIGNEQNTNTPQAVDFFRKSNLWLEQVALGAY----HSLFCDKKGHL 202
            ||: ::|.|:|.|.:..||.|:.|:|..|:.::     .|..:::...:|    |.|...:.|.:
Human    38 TDN-DEVFVFGLNYSNCLGTGDNQSTLVPKKLE-----GLCGKKIKSLSYGSGPHVLLSTEDGVV 96

  Fly   203 YAVGHGKGGRLGIGLENSLPAPKRVKVSSKLSGDSIQCISVSRQHSLVLTHQSLVFACGLNTDHQ 267
            ||.||....:||.|..|...||  |:|.:.|....:..::....||:.|.....|||.|.|...|
Human    97 YAWGHNGYSQLGNGTTNQGIAP--VQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQ 159

  Fly   268 LGVRDAAEQLTQFKEVVALRDKGASDLVRV--IACDQHS----IAYGSRCVYVWGAN-QGQFGIN 325
            :|....|.|.|..|....|..|      ||  |||.|.|    :..|.  ||.||.| .||.|:.
Human   160 VGSGSTANQPTPRKVTNCLHIK------RVVGIACGQTSSMAVLDNGE--VYGWGYNGNGQLGLG 216

  Fly   326 SNTPSITVPTLIKLPAKTTIRFVEANNAATVIYNEEKIITLCYADKTRYIKTPNYEDLKSISVMG 390
            :|...:|...:..|              .:|..|:   |...||                     
Human   217 NNGNQLTPVRVAAL--------------HSVCVNQ---IVCGYA--------------------- 243

  Fly   391 GNLKNSTKGSAAALKLLMLTETNVVYLWYENTQQFYRCNFSPIRLHQIKKILYKCNQVMVLSEDG 455
                          ..|.||:..::|.|..||.                               |
Human   244 --------------HTLALTDEGLLYAWGANTY-------------------------------G 263

  Fly   456 CVYRGKCNQIALPSSALQEKSRGSLDNWQDNDQNKTEISREHVIRIELQRVPNIDRATYIFCDEG 520
            .:..|..|.:..|:..:.||                    |.|:.|..             |...
Human   264 QLGTGNKNNLLSPAHIMVEK--------------------ERVVEIAA-------------CHSA 295

  Fly   521 FSSFAVLQESHTKYFRKPSLPRREHSFKKLLHETSDCDAVHDVVFHVDGEKFAAHKFIIYSRAPG 585
            .:|.|..|..|                                                      
Human   296 HTSAAKTQGGH------------------------------------------------------ 306

  Fly   586 LRDLIRCYLDKDIYLNFDHLTGKMFELILNHIYSSYWPTEDDIDCIQQSLGPANPQQRTRTCEMF 650
                        :|: :....|:  .:||.|: :.:..|:|...|.      |.|....|...: 
Human   307 ------------VYM-WGQCRGQ--SVILPHL-THFSCTDDVFACF------ATPAVSWRLLSV- 348

  Fly   651 LPHLEKFQLVELTKYVQSYVRDHQFPLPNARKLFNRLYRSDHPELYDVRIVCKDGKVLGAHKCML 715
                                 :|:..|..|..|....   |.||..|::... |||.:..||.:|
Human   349 ---------------------EHEDFLTVAESLKKEF---DSPETADLKFRI-DGKYIHVHKAVL 388

  Fly   716 VARLEYFEMMFMHLWAERSSVTMEGVPAEYMEPV----LDYLYSLDNEAFCKQGYLETFLYNMIT 776
            ..|.|:|..||...|.|.....:|  ..::..||    |.|||: |......:..:     .::.
Human   389 KIRCEHFRSMFQSYWNEDMKEVIE--IDQFSYPVYRAFLQYLYT-DTVDLPPEDAI-----GLLD 445

  Fly   777 ICDQYFIESLQNVCESLILDKISIRKCGEMLEFAAMYNCKILQKGCMDFICQNLSRVLCYRSIEQ 841
            :...|....|:.:|:.:|...|::.....:...|..|:.:.|::.|..|...:|:.|....:..|
Human   446 LATSYCENRLKKLCQHIIKRGITVENAFSLFSAAVRYDAEDLEEFCFKFCINHLTEVTQTAAFWQ 510

  Fly   842 CDGETLK 848
            .||..||
Human   511 MDGPLLK 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8060NP_611117.2 ANK <46..138 CDD:238125
ANK repeat 56..87 CDD:293786
Ank_4 57..111 CDD:290365
ANK repeat 89..121 CDD:293786
Ank_2 95..>138 CDD:289560
RCC1 147..195 CDD:278826 13/51 (25%)
RCC1 199..251 CDD:278826 16/51 (31%)
BTB 547..>635 CDD:295341 8/87 (9%)
BTB 684..795 CDD:279045 28/114 (25%)
BTB 697..798 CDD:197585 26/104 (25%)
SPOP_C_like 798..>834 CDD:269810 7/35 (20%)
RCBTB1NP_001339429.1 RCC1 1 40..91 14/56 (25%)
ATS1 43..>316 CDD:227511 90/470 (19%)
RCC1 2 93..145 17/53 (32%)
RCC1 3 147..198 20/56 (36%)
RCC1 4 199..250 19/104 (18%)
RCC1 5 252..302 16/113 (14%)
RCC1 6 304..356 14/149 (9%)
BTB_POZ_RCBTB1_CLLD7 350..466 CDD:349662 33/127 (26%)
BACK_RCBTB1 466..531 CDD:350603 13/52 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4885
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.