DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8060 and Sergef

DIOPT Version :10

Sequence 1:NP_611117.2 Gene:CG8060 / 36824 FlyBaseID:FBgn0034113 Length:1189 Species:Drosophila melanogaster
Sequence 2:XP_006541006.1 Gene:Sergef / 27414 MGIID:1351630 Length:465 Species:Mus musculus


Alignment Length:420 Identity:93/420 - (22%)
Similarity:156/420 - (37%) Gaps:80/420 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 GSNKNYNLGIGNEQNTNTPQAVDFFRKSNLWLEQVALGAYHSLFCDKKGHLYAVGHGKGGRLGIG 216
            |:|....||:|::::...||.:..|.::.. ::.|..|..||......|.|:..|..|.|:||:|
Mouse    22 GANSYGQLGLGHKEDVFLPQQLSDFCQAGC-IKSVTGGGGHSAVVTDGGDLFVCGLNKDGQLGLG 85

  Fly   217 -LENSLPAPKRVKVSSKLSGDSIQCISVSRQHSLVLTHQSLVFACGLNTDHQLGVRDAAEQLTQF 280
             .|..|    |..:...|.|..|:.::.....:::||.:..|.:||.|...||||.....:....
Mouse    86 HTEEVL----RFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPRKCVVP 146

  Fly   281 KEVVALRDKGASDLVRVIACDQHSI---AYGSRCVYVWGANQGQFGINSNTPSITVPTLIKLPAK 342
            :.:..||:|    :|.|.|..:|::   |.||  |:.||......| ....|...:|..:.....
Mouse   147 QAIECLREK----VVCVAAGLRHALATTATGS--VFQWGTGLASSG-RRLCPGQNLPLFLTAKEP 204

  Fly   343 TTIRFVEANNAATVIYNEEKIITLC---------------YADKTRYIKTPN------YEDLKSI 386
            :.:..:|.:.|...:...:...:|.               .|.:..::..|.      ::|.|..
Mouse   205 SRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLASRAVFLPLPQRIEAHYFQDEKVT 269

  Fly   387 SVMGGNLKNSTKGSAAALKLLMLTETNVVYLWYENTQQFYRCNFSPI--RLHQIKKILYKCNQVM 449
            :|..|           ...|:..|||..|:.|       .|.::..:  ||...:.      |..
Mouse   270 AVWSG-----------WTHLVAKTETGKVFTW-------GRADYGQLGRRLEPPEA------QKP 310

  Fly   450 VLSEDGCVYRGKCNQIALPSSAL---QEKSRGSLDN----------WQDNDQNKTEISREHVI-- 499
            |..:....::|..|.:..|...|   .|.|.||..|          |..|:........|..:  
Mouse   311 VEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRDKCCSWGWNEHGMCGDGTESNVWT 375

  Fly   500 RIELQRV-PNIDRATYIFCDEGFSSFAVLQ 528
            ...:|.: |:..|...:.|..| .|.||.|
Mouse   376 PTPVQALPPSPSRLLLVGCGAG-HSLAVCQ 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8060NP_611117.2 ANKYR <51..141 CDD:440430
ANK repeat 56..87 CDD:293786
ANK repeat 89..121 CDD:293786
ATS1 140..>355 CDD:444065 54/206 (26%)
BTB_POZ 543..643 CDD:453885
BTB2_POZ_IBtk 691..802 CDD:349611
BACK_IBtk 798..857 CDD:350575
SergefXP_006541006.1 ATS1 19..377 CDD:444065 84/390 (22%)
RCC1 356..402 CDD:395335 9/46 (20%)
Blue background indicates that the domain is not in the aligned region.

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