DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8060 and SERGEF

DIOPT Version :10

Sequence 1:NP_611117.2 Gene:CG8060 / 36824 FlyBaseID:FBgn0034113 Length:1189 Species:Drosophila melanogaster
Sequence 2:NP_036271.1 Gene:SERGEF / 26297 HGNCID:17499 Length:458 Species:Homo sapiens


Alignment Length:360 Identity:76/360 - (21%)
Similarity:126/360 - (35%) Gaps:68/360 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 VLVWGSNKNYNLGIGNEQNTNTPQAVDFFRKSNLWLEQVALGAYHSLFCDKKGHLYAVGHGKGGR 212
            :..||:|....||:|::::...||.::.|.|... :.::..|..||......|.|:..|..|.|:
Human    17 LFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRS-VRRITGGGGHSAVVTDGGDLFVCGLNKDGQ 80

  Fly   213 LGIGLENSLPAPKRVKVSSKLSGDSIQCISVSRQHSLVLTHQSLVFACGLNTDHQLGVRDAAEQL 277
            ||:|....:|.....|   .|.|..||.::.....:::||....|.:||.|:..||||.....:.
Human    81 LGLGHTEDIPYFTPCK---SLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRC 142

  Fly   278 TQFKEVVALRDKGASDLVRVIACDQHSI-AYGSRCVYVWGANQGQFGINSNTPSITVPTLIKLPA 341
            ...:.:...::|    :|.:.|..:|:: |..|..|:.||......| ....|..|:|.......
Human   143 VVPQAIELHKEK----VVCIAAGLRHAVAATASGIVFQWGTGLASCG-RRLCPGQTLPLFFTAKE 202

  Fly   342 KTTIRFVEANNAATVIYNEEKIITLCYADKTRYIKTPNYEDLKSISVMGGNLKNSTKGSAAAL-- 404
            .:.:..:|.:.|..|:...:...:|              .|...:.|.|.|........||.|  
Human   203 PSRVTGLENSKAMCVLAGSDHSASL--------------TDAGEVYVWGSNKHGQLANEAAFLPV 253

  Fly   405 ----------------------KLLMLTETNVVYLW-------------------YENTQQFYRC 428
                                  .|:..|||..::.|                   .|....|..|
Human   254 PQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPC 318

  Fly   429 NFSPIRLHQIKKILYKCNQVMVLSEDG-CVYRGKC 462
            :..|..:......|....:|...||.. .:..|.|
Human   319 SRPPNSMPSSPHCLTGATEVSCGSEHNLAIIGGVC 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8060NP_611117.2 ANKYR <51..141 CDD:440430
ANK repeat 56..87 CDD:293786
ANK repeat 89..121 CDD:293786
ATS1 140..>355 CDD:444065 52/207 (25%)
BTB_POZ 543..643 CDD:453885
BTB2_POZ_IBtk 691..802 CDD:349611
BACK_IBtk 798..857 CDD:350575
SERGEFNP_036271.1 RCC1 1 15..67 13/50 (26%)
ATS1 23..375 CDD:444065 74/354 (21%)
RCC1 2 68..119 16/53 (30%)
RCC1 3 120..171 13/54 (24%)
RCC1 4 172..230 11/72 (15%)
RCC1 5 231..283 8/51 (16%)
RCC1 6 284..351 9/66 (14%)
RCC1 7 352..402 1/2 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 420..458
Blue background indicates that the domain is not in the aligned region.

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