Sequence 1: | NP_611117.2 | Gene: | CG8060 / 36824 | FlyBaseID: | FBgn0034113 | Length: | 1189 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001171421.1 | Gene: | Rpgr / 19893 | MGIID: | 1344037 | Length: | 1039 | Species: | Mus musculus |
Alignment Length: | 1177 | Identity: | 201/1177 - (17%) |
---|---|---|---|
Similarity: | 378/1177 - (32%) | Gaps: | 385/1177 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 57 GRSAVHMSASTARYEILEWLLNHGAYINGQDYE--------SGSSPLHRALYYGSIDCAVLLLRY 113
Fly 114 GASLE-LLDEDTRCPLQAICRKCDDDDLATDSQNDVLVWGSNKNYNLGIGNEQNTNTPQAVDFFR 177
Fly 178 KSNLWLEQVALGAYHSLFCDKKGHLYAVGHGKGGRLGIGLE---------NSLPAPKRVKVSSKL 233
Fly 234 SGDSIQCISVSRQHSLVLTHQSLVFACGLNTDHQLGVRDAAEQLTQFKEVVALRDKGASDLVRVI 298
Fly 299 ACDQHSIAYGSR--CVYVWG-ANQGQFGIN-SNTPSITVPTLIKLPAKTTIRFVEANNAATVIYN 359
Fly 360 EEKIITLCYADKTRYIKTPNYEDLKSISVMGGNLKNSTKGSAAALKLLMLTETNVVYLWYENTQQ 424
Fly 425 FYRCNFSP---------IRLHQIKKILYKCNQVMV----------LSEDGCVYRGKCNQIALPSS 470
Fly 471 A--------LQEKSRG------SLDNWQDNDQNKTEISREHVIRI----ELQRVPNIDRATYIFC 517
Fly 518 DEGFSSFAVLQESHTKYFRKPSLPRREHSFKKLLHETSDCDAVHDVVFHVDGEKFAAHKFIIYSR 582
Fly 583 --APGL-----RDLIRCYLDKDIYLNFDHL-------TGKMFELILNHIYSSYWPTEDDIDCIQQ 633
Fly 634 SLGPANPQQRTRTCEMFLPHLEKFQLVELTKYVQSYVRDHQFPLPNARKLFNRLYRSDHPELYD- 697
Fly 698 -----VRIVCKDGKVLGAHKCMLVARLEYFEMMFMHLWAERSSVTMEGVPAEYMEPVLDYLYSLD 757
Fly 758 NEAFCKQGYLETFLYNMITICDQYFIESLQNVCESLILDKISIRKCGEMLEFAAMYNCKILQKGC 822
Fly 823 MDFICQNLSRVLCYRSIEQCDGETL----KCLNDHYRKMFK--RVFDYRQITPFSEAIEDELLLS 881
Fly 882 FVDGCDVDLNYRMDAESK--LKQAAKHKQKDLRKQDARHQYEQQAISSMMRSLSISESTQGTEVP 944
Fly 945 SSPQDSARSEDKNWSRVVDKKDQKRKLAE--------------------TALKVNNTLKHEDPPT 989
Fly 990 QELVPIERKPLKEQTPPPPSHETEPTTPLSKSY---NLDFSSLTPQSQKLSQKQRKRLSSESKSW 1051
Fly 1052 RTNNP-PLVEQSSTPVAVPNAWGVTTTPSGSFNDSFTSPTTGSSTDPTSFANMMRGHATSSTTPT 1115
Fly 1116 DQSQSFS 1122 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG8060 | NP_611117.2 | ANK | <46..138 | CDD:238125 | 16/89 (18%) |
ANK repeat | 56..87 | CDD:293786 | 7/29 (24%) | ||
Ank_4 | 57..111 | CDD:290365 | 10/61 (16%) | ||
ANK repeat | 89..121 | CDD:293786 | 6/40 (15%) | ||
Ank_2 | 95..>138 | CDD:289560 | 8/43 (19%) | ||
RCC1 | 147..195 | CDD:278826 | 13/47 (28%) | ||
RCC1 | 199..251 | CDD:278826 | 15/60 (25%) | ||
BTB | 547..>635 | CDD:295341 | 16/101 (16%) | ||
BTB | 684..795 | CDD:279045 | 18/116 (16%) | ||
BTB | 697..798 | CDD:197585 | 16/106 (15%) | ||
SPOP_C_like | 798..>834 | CDD:269810 | 3/35 (9%) | ||
Rpgr | NP_001171421.1 | RCC1_2 | 78..104 | CDD:290274 | |
RCC1 | 93..139 | CDD:278826 | 2/5 (40%) | ||
RCC1 | 144..193 | CDD:278826 | 9/60 (15%) | ||
RCC1_2 | 180..209 | CDD:290274 | 9/50 (18%) | ||
RCC1 | 196..243 | CDD:278826 | 14/72 (19%) | ||
RCC1 | 246..296 | CDD:278826 | 15/60 (25%) | ||
RCC1 | 301..348 | CDD:278826 | 12/50 (24%) | ||
RCC1 | 352..398 | CDD:278826 | 8/45 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |