DRSC/TRiP Functional Genomics Resources

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Protein Alignment ved and CG34031

DIOPT Version :9

Sequence 1:NP_898897.1 Gene:ved / 368201 ZFINID:ZDB-GENE-030813-1 Length:278 Species:Danio rerio
Sequence 2:NP_001246894.1 Gene:CG34031 / 3885665 FlyBaseID:FBgn0054031 Length:219 Species:Drosophila melanogaster


Alignment Length:198 Identity:51/198 - (25%)
Similarity:83/198 - (41%) Gaps:39/198 - (19%)


- Green bases have known domain annotations that are detailed below.


Zfish    43 MEKHMEEKYTE-----EKYLQEKSMEKF----------MHEKYTEEKHMPEKYTE--GKRIQK-- 88
            |..|:|:..:.     ||.:|.|...|.          ..|.::.:..:|:..|.  ...|.|  
  Fly     1 MNPHLEQDKSRLNSCIEKSIQTKKKGKLGAFSIDSILSTSEAHSSQNSLPKDNTNVTSSDISKLY 65

Zfish    89 ---HTHESGFSSSTEDEELSGCESEGSR----SEGSG-SRSPAAPGSVAPASGSGSPS------- 138
               .|.|....:...:.:|  |:....|    .:||. ||......|:.|:..:.|.:       
  Fly    66 AFSFTQEGNNKTPLTNFDL--CQGHPRRLPITFDGSTVSRFVWRTESILPSYITNSTNLQEKQLR 128

Zfish   139 ---SGRRPRTAFSSEQISSLERVFKRNAYLGAQDKAELCRTLKLTDKQIRNWFQNRRMKLKRTVQ 200
               :.|:||.|:|:.|:..||..|..:.||....:.||.::|.||:.|::.||||||.|.|:.:.
  Fly   129 KRFTDRKPRQAYSASQLERLENEFNLDKYLSVSKRVELSKSLSLTEVQVKTWFQNRRTKWKKQLT 193

Zfish   201 DSL 203
            ..|
  Fly   194 SRL 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vedNP_898897.1 Homeobox 145..196 CDD:278475 21/50 (42%)
CG34031NP_001246894.1 Homeobox 136..189 CDD:278475 23/52 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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