DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7747 and ppil4

DIOPT Version :9

Sequence 1:NP_611113.1 Gene:CG7747 / 36820 FlyBaseID:FBgn0034109 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_001121802.1 Gene:ppil4 / 554886 ZFINID:ZDB-GENE-030131-6251 Length:454 Species:Danio rerio


Alignment Length:238 Identity:82/238 - (34%)
Similarity:126/238 - (52%) Gaps:28/238 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 VRLNTNLGPLNLELFCDQTPRACDNFIKHCANGYYNNVMFHRSIRNFIVQGGDPTGSGSGGESIW 346
            |.|.|.||.:.::|:.::.|:|..||:|.|...|||..:.|...|:||:|.|||||:|.||||::
Zfish     3 VLLETTLGDIVIDLYTEERPKASLNFLKLCKIKYYNYCLIHNVQRDFIIQTGDPTGTGRGGESVF 67

  Fly   347 GKK-------FEDEFKPNLTHTGRGVLSMANSGPNTNGSQFFITY-RSCKHLDGKHTIFGKLVGG 403
            .|.       ||.|..|.:.|..:|.:||.|:|.:.:||||.||. .:..:|||.||:||::..|
Zfish    68 CKLYGDQARFFESEKMPRIKHRKKGTVSMVNNGSDQHGSQFLITTGENVDYLDGVHTVFGEVTEG 132

  Fly   404 LDTLQKMENIEVDNKDRPIEDIIIESSQVFVNPFAEAA-------------EQLAKER--EEEAA 453
            :|.|.|:....|||...|.:||.|..:.:..:||.:.|             :||...|  .:||.
Zfish   133 MDVLAKINETFVDNDFIPFQDIRINHTVILDDPFDDPAGLPVPDRSPEPTKQQLDSGRIGADEAI 197

  Fly   454 GKEEIVKKEEQQKRMKEPLKVYREGVGKYLKLQTVAKKPEAPL 496
            ..:|....||..:.:|:     :|...:.:.|:.|...|:|.:
Zfish   198 NDDEGKDPEELDELIKD-----KEAKTQAILLEMVGDLPDADI 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7747NP_611113.1 RING 25..238 CDD:302633
cyclophilin_RING 281..439 CDD:238904 67/164 (41%)
ppil4NP_001121802.1 cyclophilin_RRM 4..169 CDD:238902 66/164 (40%)
RRM 172..>320 CDD:223796 14/69 (20%)
RRM_PPIL4 237..319 CDD:240681
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.