DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9068 and dnah5l

DIOPT Version :10

Sequence 1:NP_611111.1 Gene:CG9068 / 36817 FlyBaseID:FBgn0034106 Length:1227 Species:Drosophila melanogaster
Sequence 2:XP_002666734.3 Gene:dnah5l / 335340 ZFINID:ZDB-GENE-091204-287 Length:4667 Species:Danio rerio


Alignment Length:1374 Identity:285/1374 - (20%)
Similarity:541/1374 - (39%) Gaps:279/1374 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASSSAVEDEHLTDSDLTDDEERSVEPRQEEIRPETPKPSYSDEELNQLVGYIQRMSVLSCLDHR 65
            :|.:.::.|..:.::.:.||:                  .|..||.....|....|......:..
Zfish   150 IAEAISLADMEVEEAIIADDK------------------FYMIEEFFSANGSKSLMLFYQATESS 196

  Fly    66 DWQEGTLDIIRGWLLEVHEPLLTIYYDRDALAA-CLGMPSMCVSDLSYFRREPNEIFSVEGFHDE 129
            :....|.::.:|     .:.|.....|.:||.. ||           :|.|..::..:......|
Zfish   197 NSGNDTSNVAKG-----QKKLFITSGDHEALTGQCL-----------FFLRITDKAITTTNISQE 245

  Fly   130 INFGTLTSDVDGCLME---LLDRLYVPFFRNYLEW--------NATVRNRFCSSMDRFLAFLSG- 182
            :|||.|.......|..   ||.::.....::..:|        |..|:| |..|:|:|...||. 
Zfish   246 VNFGMLDCSESSILHNLEFLLTQVMNQALKSQEDWGAIKDGQMNPDVQN-FLRSVDKFTFTLSSV 309

  Fly   183 ---------MHHQISGMSVMYV--PFVIKELTAGPVDRYLVGSLEGIALYWTTQIRTLLAD-DTL 235
                     :||..|...:.::  |   ::.:....:..||..||.:.:||..||..:|.: :.:
Zfish   310 MRNMEEKFKLHHIPSAPDLSHIQKP---EDYSYAANNSELVEDLEAVLVYWAKQIEQVLTESERI 371

  Fly   236 TVPHDLVTVRDEFEFWEYRYEVLQGINDQLAHSDVQKVLLLLHNAQSVHMPQMDGLIERARKELH 300
            ....|.:....|...|:.|......:.|::....|:|::.:||.|:|..|.:.        |||.
Zfish   372 RRESDDIGPSAELAHWKRRMITFCSLMDEIKDPYVKKIIGILHAAKSKTMSKW--------KELD 428

  Fly   301 KSLS--------NIKYLHLLIEPCSKIDAATSPADLTKLLPRIIHLIRFIWLNSEYYNTTRLIAA 357
            .|::        |:|||..|.:....::.:| |..:.|.:|::::.|..|...|::|||:..:.:
Zfish   429 ASITIVANEAKDNVKYLSTLDKFFELLEKST-PTSMLKHIPKLMNSIHMIHRVSQFYNTSEHMTS 492

  Fly   358 LFRNLSNQIIR-----FCTKQTKV-----EEILSGKPRFGIRICNVAIECCLTYRGIYDTISRDL 412
            ||..::||::.     .|...|||     :|:|.            .::.|:.....|....|.:
Zfish   493 LFVKVTNQMVTTSKAYLCQGVTKVWELDRKELLK------------RMKECIELNQEYQQCFRQM 545

  Fly   413 AQKHTQMP----WELDEGLIFNHIDAFVERLNDVIDICESMIVFGRLDENGSIPKPVFGGTCGEE 473
            .:|..|.|    .||.|..||...|.|.:||..:.|:..:      |::...:....|.|     
Zfish   546 KEKIQQNPHERQLELSENYIFGKFDTFCKRLEKITDMATT------LEDFSVLQFMKFEG----- 599

  Fly   474 LEKIAESVEVQFLDTLNKLQQNSQAY-ILNVHRADWYADVAGFRKNMQKLEETVQRLIFNVFQQV 537
                .|.:.:::.:.::.::  |:.| :|:..:.::..|...||..:|.|.::|..||....|:.
Zfish   600 ----VEKIYMRYQNIVSTIK--SKTYNVLDHRKLEFDNDYIEFRNQIQVLYQSVDALIDTWLQRP 658

  Fly   538 SNVEEMLEALQAMLFYSYRQRGTLRK------TYLKETSKLWRMFSKEMDATSRKLLEEQSRESW 596
            ...|::||.|........||....:|      .|..:...:.:.:.||.|....:|.....:..|
Zfish   659 LTTEQVLELLSRFENGVGRQMDLNQKYMVVLQRYECDLEFVRKCYQKEKDNPVSQLTPLAGKIEW 723

  Fly   597 LSKHV--SIALGYRINLERLTWLR--DRLKNSEWLPAVKESSPALAKFDALRHEFQKEIRLAYDD 657
             |||:  .|.|..:|..::|..|:  ||.|       :..|...||   |:..|::...:.|:.:
Zfish   724 -SKHLFKKIELPMQILKDKLDILQMPDRRK-------IIRSYNRLA---AVLLEYEMIHQKAWVE 777

  Fly   658 WVAKCCGFSGDLCQRLDRYLVVR---SKKFKGLLECNIDASVLELCEQAQHFERMGFAIPS---- 715
            .|.  .|.||     |:..|:.|   :|:|    ..|:|..|||:.::|.:..::|..:|.    
Zfish   778 GVE--LGLSG-----LNASLLTRHPTTKEF----YVNLDPLVLEVLQEANNMYKLGALVPDGIHD 831

  Fly   716 ------TMKKLYERYDTIRSLYNGIIKLALSHNRILAVLSDRERKLFRPLIQACDRQLAPGVFKI 774
                  .:|:...:...:...::.::|      :|..||    :...:|.|::.:..|:||:..:
Zfish   832 MAAKEPQLKEYRYKLQMMLKEFHAVVK------KIPGVL----KSPMKPFIRSVETALSPGLTIL 886

  Fly   775 TYGSEFNEEFFEDGTEFIAEFQELVLIFK--------RANRGVARICEKICGTCLLHFAFSGSVD 831
            ::.| .|.::| .|..:.| .|||..:.|        |.|..:    |.:|.|.||....:..|.
Zfish   887 SWTS-LNIDYF-IGCVYKA-LQELEQVLKVVTDILDCRINHTL----ESMCSTTLLTLPENEPVT 944

  Fly   832 ISVFQQQLSSRLSSSGDIL--------RSYYSHVVEL-----------------LSAFSGQFQSV 871
            ..:|....::.:|:..:.|        ||......||                 |...:.|....
Zfish   945 PEMFLTHTAATISTERETLKVASQQVERSMLEIAEELNRMLKPSERVNLKKCSCLHPDAKQMTRC 1009

  Fly   872 DDEMSAEWIAYVNDMDDMLASSLMTSARGSLNKLYEALHCDAD----------MASAPIIVVESD 926
            ...:...:...:..:......:|:|:.:.|||.|:..|...:.          ....|:..|..:
Zfish  1010 LQCLPCAFYIMMGQLCQRNTEALVTATKSSLNALHRRLLAASSSYRSSSPSGATIQVPLFRVSVE 1074

  Fly   927 VKDGRIVFTPDMDAIGDMINGIVDSIRSMLDQFPRLGY-KLKLPKKQQRQ------GFASVFRE- 983
            :....|||.|..:.|..::|..|:.:.||....|...| .|:..:.|..|      |..:|..: 
Zfish  1075 LAIPNIVFRPSFEHIQGILNKGVNMVLSMAKDIPLWNYFHLQQDQLQAEQVAAREHGDETVVSKP 1139

  Fly   984 ------DQECSE-------------LMRSIQAEIGIQREELAKYESEWNKNRVLWQTTEEEFRQR 1029
                  |:..:|             |:.|::|:.|...|:|:::.:.||      |...|:.:..
Zfish  1140 ILLRSLDRHVTEHKDVNKSLSQLVPLVSSLKADAGDILEDLSQFSALWN------QDPAEQVKAF 1198

  Fly  1030 LMSKSRTAGVFEGGIEHYSALADDVIFEDAITNVYFILINQNALKSTMLDWIEKWQ-----ALNI 1089
            |.:....|. |...:..|||....:........|..||....:||.:::.....|:     |||.
Zfish  1199 LQTNPILAD-FSTQLSLYSAYETQIHELPQTCTVGPILFETESLKMSLIQECHTWKREFGAALNQ 1262

  Fly  1090 KML--LDHGSNLMGAVYRYMRRNERNVMKVPRTIRETVAA-KQLFEKLLKDVPVKQSAFTPMLEL 1151
            :..  :...|:.:..|.|.::|...::    ..:||::.| ::|.|:.::    .::...|:.|.
Zfish  1263 QASAGMTEISSFVDGVNRQLQRPISDL----DDVRESMGALRELREEEIR----IETIMGPVEES 1319

  Fly  1152 FVLLHKYQVKLSEETFEQVMGLETAWLHYLQVLEEADEMLDNEDSEAKLLLAKHGEKFKLILKDF 1216
            |.||:::.:..::...|::.|:..||.....:.:|..:.|.:.:...|..|....|.|:..::.|
Zfish  1320 FALLNRHDLFFNDGNAERIDGVVYAWKELKVMAKETQKKLSDVEPHMKAELIAGVEVFQKSVESF 1384

  Fly  1217 LEDFYSKLP 1225
            ..|:.:..|
Zfish  1385 YGDYDNSGP 1393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9068NP_611111.1 DHC_N1 212..784 CDD:462457 140/618 (23%)
dnah5lXP_002666734.3 DHC_N1 347..896 CDD:462457 140/619 (23%)
DHC_N2 1441..1846 CDD:462462
DYN1 1652..4309 CDD:227570
AAA_6 1981..2308 CDD:463697
Dynein_C 4360..4664 CDD:465677
Blue background indicates that the domain is not in the aligned region.

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