DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9068 and Dnah7

DIOPT Version :10

Sequence 1:NP_611111.1 Gene:CG9068 / 36817 FlyBaseID:FBgn0034106 Length:1227 Species:Drosophila melanogaster
Sequence 2:NP_001406479.1 Gene:Dnah7 / 252893 RGDID:621798 Length:4023 Species:Rattus norvegicus


Alignment Length:1354 Identity:237/1354 - (17%)
Similarity:430/1354 - (31%) Gaps:509/1354 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LTDSDLTDDEERSVEPRQEEIRPE------TPKP---------SYSDEELNQLVGYIQRMSVLSC 61
            :.|..|.|..|:..:.:..|:.|.      .|||         ||..:.||.:     ..::|:.
  Rat   221 IVDFVLKDPREKEDDTKITELPPHRAEMEVLPKPWRRSFLSACSYIRDHLNAM-----NPTMLAV 280

  Fly    62 LD-----------------------------------HRDWQEGTLDIIRGWLLEVHEPLLTIYY 91
            ||                                   |.:..:.||  ::.|..||.    .|||
  Rat   281 LDLWHSTFKKLRLVDIEEFHNRQDALELSGFQNIVIKHMESAKETL--LKTWFPEVQ----NIYY 339

  Fly    92 DRDA--------LAACLGMPSMCVSDLSYFRREPNEIFSVEGFHDEI---NFGTLTSDVDGCLME 145
            ..:.        .:|.|.....|.:.|...:.:...:.|::.|.|.|   .......:..|.:|.
  Rat   340 QGNKKKQLPTGDSSAKLESFFNCAATLMTLQLQDLILVSMQDFTDLIAQPPESIRAFEHPGFIMR 404

  Fly   146 L-LDRLYVPF---FRNYLEWNATVRNRFCSSMDRFLAFLSGMHHQISGMSVMYVPFVIKELTAGP 206
            | ||:..|.|   |.:|::....|                   ::|...:|.:||.|..:|.:  
  Rat   405 LVLDKKAVKFEPEFTDYIDILVNV-------------------YEIMIKAVSFVPRVETKLYS-- 448

  Fly   207 VDRYLVGSLEGIALYW-----TTQIRTLLADDTLTVPHDL---VTVRDEFEFWEY--RYEVLQGI 261
                          .|     .|.::.::.|:.:....:.   |.:|:.....|:  .|:..|.:
  Rat   449 --------------KWESKSKPTTLKPIILDEIIDAHKEKIREVVLRESVAPTEHLKMYDKYQFL 499

  Fly   262 NDQLAHSDVQKVLLLLHNAQSVHMPQMDGLIERARKELHKSLSNIKY-------LHLLIEPCSK- 318
            ..:.|..|:::.|....|        .:.|||..|| ..|....|:|       |.:....|.: 
  Rat   500 ITRQAEQDIEEFLTQSQN--------YERLIEEIRK-YQKLGEEIQYTSRKTVRLGMFEMHCEEL 555

  Fly   319 IDAATSPADLTKLLPRIIHLIRFIWLNSEYYNTTRLIAALFRNLSNQIIRFCTKQTKV-EEILSG 382
            |.:....||:.                     ..:|||.:||:........|.:..|: |:.||.
  Rat   556 IRSLVKRADII---------------------CGKLIAKMFRDHQEVNTMLCEEFEKIAEKALST 599

  Fly   383 KPR---------------------FGIRICNVAIECCLTYRGIYDTIS---RDLAQKHTQMPWEL 423
            .|.                     .|.|:  |..:.||.:  :.:.::   .|:...::...|..
  Rat   600 PPNTAELMEMKAHIQKVETTDMLDLGQRL--VDSKNCLAF--LIECVNFSPADIRLNNSVFQWYG 660

  Fly   424 DEGLIFN-------------------HIDAFVERLNDVIDICESMIVFGRLDENGSIPKPVFGGT 469
            ..|.||:                   ..:.|||.|.......|....||.|.:.....|.  ...
  Rat   661 RMGEIFDEHRKIIKDKTEQYQEGLKLRCERFVEELESYAKQAEEFYTFGDLQDVQRYLKK--AQV 723

  Fly   470 CGEELEKIAESVEVQF-------------LDTLNKLQQNSQAYI---------LNVHRADW---- 508
            ...:|:..|:.:| ||             .....|:|.....|:         ...||| |    
  Rat   724 LNSKLDAAADKIE-QFNAEEEAFGWIPSVYPQRKKIQDGLNPYLRLYETAVEFSTKHRA-WTEGP 786

  Fly   509 ---------YADVAGFRKNMQKLEETVQ------RLIFNVFQQVSNVEEMLEALQAMLFYSYRQR 558
                     .|||..:.:.:.|||:...      .:...|..:|.:.::.:..:|.:.....|.|
  Rat   787 YHKVNPDQVEADVGNYWRGLYKLEKAFHDSPNALAMTKKVRARVEDFKQYIPLVQVICNPGLRPR 851

  Fly   559 GTLRKTYLKETSKLWRMFSKEM--------DATSRKLLEEQSRESWLSKH--VSIALGYRINLER 613
            .             |...|..:        |:|....: :.:.|.:|.:.  :|.|.....:||:
  Rat   852 H-------------WEAMSAIVGYPLQPSDDSTVFSFI-DMNLEPFLDRFEGISEAASKEYSLEK 902

  Fly   614 LTWLRDRLKNSEW------LPAVKESSP-ALAKFDALRHEFQKEIRLAYDDWVAKCCGFSGD--- 668
               ..|::. :||      :...:||.. .|:..|        :|::..||.:.|.....|.   
  Rat   903 ---SMDKMM-TEWEAMEFVIHPYRESGTFILSAVD--------DIQMLLDDHIIKTQTMRGSPFI 955

  Fly   669 ----------------LCQRLDRYLVVRSKKFKGLLECNIDASVLELCEQAQHFERMGFAIPSTM 717
                            |.:.||.:|.|::...                    :.|.: |:.|..|
  Rat   956 KPYEKQMREWEGKLLLLQEILDEWLKVQATWL--------------------YLEPI-FSSPDIM 999

  Fly   718 KKLYE---RYDTIRSLYNGIIKLALSHNRILAVLS-----DRERK---LFRPLIQACDRQLA--- 768
            .::.|   |:..:...:..::|:.:.:..:|||::     :|.:|   |...:::..:..|.   
  Rat  1000 SQMPEEGRRFTAVDKTWRDVMKMVVQNKHVLAVVTIERMLERMKKSNELLELILKGLNEYLEKKR 1064

  Fly   769 ---PGVFKITYGSEFNEEFFEDGTEFIAEFQELVLI---FKRANRGVARICEKICGTCLLHFAFS 827
               |..|.::     |:|..    |.::|.::...:   .|:...|:||:            .|:
  Rat  1065 LFFPRFFFLS-----NDELL----EILSETKDPTRVQPHLKKCFEGIARV------------EFT 1108

  Fly   828 GSVDISVFQQQLSSRLSSSGDILRSYYSHVVELLSAFSGQFQSVDDEMSAEWIAYVNDMDDMLAS 892
            .::||:..:       ||.|:        ||||:...|                           
  Rat  1109 ETLDITHMK-------SSEGE--------VVELVDTIS--------------------------- 1131

  Fly   893 SLMTSARGSLNKLYEALHCDADMASAPIIVVESDVKDGRIVFTPDMDAIGDMI-----NGIVDSI 952
              .|.|||.:.|.                :||.:    ||:.......|||.|     |..::.:
  Rat  1132 --TTKARGQVEKW----------------LVELE----RIMIKSIHKVIGDAITAYTKNARINWV 1174

  Fly   953 RSMLDQ--------FPRLGYKLKLPKKQQRQGFASVFREDQ--ECSELMRSIQAEIGIQREELAK 1007
            |....|        |..:..::.:|     .|..::  ||.  :|:..:..|   :.:.|.:|:|
  Rat  1175 RDWPGQTVLCVSQTFWTVEVQVAIP-----MGHKAL--EDYLGKCNHQIDDI---VTLVRGKLSK 1229

  Fly  1008 YESEWNKNRVLWQTTEEEFRQRLMSKSRTAGVFEGGIEHYSALADDVIFEDAITNVYFILINQNA 1072
                  :|||                  |.|         :.:..||...|.:.|    |:.:..
  Rat  1230 ------QNRV------------------TLG---------ALVVLDVHARDVLAN----LVKKRI 1257

  Fly  1073 LKSTMLDWIEK----WQALNIKMLLDHGSNLMGAVYRYMRRNERNVMKVPRTIR 1122
            ...|..:|:.:    |...|::..:.:.....|  |.|:..:.|.|: .|.|.|
  Rat  1258 SDDTDFEWLSQLRYYWHENNLETKMINAGLRYG--YEYLGNSPRLVI-TPLTDR 1308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9068NP_611111.1 DHC_N1 212..784 CDD:462457 122/727 (17%)
Dnah7NP_001406479.1 DHC_N2 756..1161 CDD:462462 91/537 (17%)
DYN1 958..3665 CDD:227570 88/507 (17%)
AAA_6 1289..1615 CDD:463697 8/23 (35%)
AAA_8 2310..2572 CDD:463701
AAA_9 2960..3181 CDD:463702
Dynein_C 3719..4019 CDD:465677
Blue background indicates that the domain is not in the aligned region.

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