DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9068 and Dnah8

DIOPT Version :10

Sequence 1:NP_611111.1 Gene:CG9068 / 36817 FlyBaseID:FBgn0034106 Length:1227 Species:Drosophila melanogaster
Sequence 2:NP_001414021.1 Gene:Dnah8 / 207117 RGDID:619986 Length:4727 Species:Rattus norvegicus


Alignment Length:1314 Identity:254/1314 - (19%)
Similarity:503/1314 - (38%) Gaps:289/1314 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 LLTIYYDRDALAACLGMPSMCVSDLSYFRREPNEIFSVEGFHDEINFGTLTSDV--------DGC 142
            ::.:|.|.   ||...:..:|:    :|.|..|::        .||..|:..||        .|.
  Rat   238 MMRLYIDN---AAPEKLKELCL----FFVRCRNDV--------AINSKTIYEDVLFTVLDASKGL 287

  Fly   143 L---MELLDRLYVPFFRNYLEWNATVRNR--------FCSSMDRFLAFLSGMHHQISGMSVMY-- 194
            |   ..:|..:::|.......|.|..:::        |..:::|:|.||.|....|.| :||.  
  Rat   288 LKGIKNMLKNIFLPAILATGNWGALNQSKQGESEKHIFTETINRYLLFLDGATISIEG-TVMLKK 351

  Fly   195 ---VPF----VIKELTAGPVDRYLVGSLEGIALYWTTQIRTLL---------ADDT--LTVPHDL 241
               :.|    ..:|:||......:|..||.:.:.|..||..:|         |||:  ||     
  Rat   352 VDNIDFSKLHTFEEVTAAASSSEMVHQLEDVLMMWYKQIEQVLIESEQMRKEADDSGPLT----- 411

  Fly   242 VTVRDEFEFWEYRYEVLQGINDQLAHSDVQKVLLLLHNAQSVHMPQMDGLIERARKELHKSLSNI 306
                 |.|.|:........|.:|:.....:.|:.:|:.|.|..:.....|..|.....::|..|:
  Rat   412 -----ELEHWKRMSAKFNYIIEQIKGPSCKAVINVLNVAHSKLLKNWRDLDARITDTANESKDNV 471

  Fly   307 KYLHLLIEPCSKIDAATSPADLTKL---LPRIIHLIRFIWLNSEYYNTTRLIAALFRNLSNQIIR 368
            :||:.|.:.|..:    ...||..:   :..:|:.||.|...|.||||:..:.:||..::||::.
  Rat   472 RYLYTLEKVCQPL----YNYDLVSMAHGIQNLINAIRMIHSVSRYYNTSERMTSLFIKVTNQMVT 532

  Fly   369 FC--------TKQTKVEE---ILSGKPRFGIRICNVAIECCL----TYRGIYDTISRDLAQKHTQ 418
            .|        |.....:|   :|.            .|:.|:    .|:..:....:.:.:...:
  Rat   533 ACKAYITDGGTNHVWDQETPAVLK------------KIQDCIFLFKEYQASFHKTRKQILESSGE 585

  Fly   419 MPWELDEGLIFNHIDAFVERLNDVIDICESMIVFGRLDENGSIPKPVFGGTCGEELEKIAESVE- 482
            ..:|:.|..||...:||.:||..:.::...:..:..| .|.:|                 |.:: 
  Rat   586 KSFEVSEMYIFGKFEAFCKRLEKITEMITIVQTYSAL-SNSTI-----------------EGIDI 632

  Fly   483 --VQFLDTLNKLQQNSQAYILNVHRADWYADVAGFRKNMQKLEETVQRLIFNVFQQVSNVEEMLE 545
              ::|.:....:::| |..||:..|.::..|.:.|...:..||..:|..:...|.::.:.::.|:
  Rat   633 LGIKFKNIYQGIKKN-QYDILDPRRTEFDTDFSDFMGKINTLEIQIQAFMNITFGKILSSQQALQ 696

  Fly   546 ALQAMLFYSYRQRGTLRKTYLKETSKLWRMFSKEMDATSRKLLEEQSRESWLSKHVSIALGYRIN 610
            .||.   :.......|:........::.:.:..|::|| :||...|..:..|::::....|    
  Rat   697 LLQR---FQKLNMPCLQLEINHTIERILQCYVAELEAT-KKLYHSQKDDPPLARNMPPIAG---- 753

  Fly   611 LERLTWLRDR-----------LKNSEWLPAVKESSPALAKFDALRH---EFQKEIRLAYDDWVAK 661
              ::.|:|..           .|||:.|.:: |....:.:::.:.:   ||:.....|   ||.:
  Rat   754 --KILWVRQLYRRINEPINYFFKNSDILSSI-EGKAVIRQYNKISYVLVEFEVVYHTA---WVKE 812

  Fly   662 CCGFSGDLCQRLDRYLVVRSKKFKGLLECNIDASVLELCEQAQHFERMGFAIPSTMKKLYERYDT 726
            .    ..|...|...|.||..: .|.|..|.|..:||:..:.:...:|...:|...|||.:....
  Rat   813 I----SQLQYALQATLFVRHPE-TGKLLVNFDPKILEVVRETKCMIKMKLDVPEQAKKLLKLESK 872

  Fly   727 IRS--LY-NGIIKLALSHNRILAVLSDRERKLFRPLIQACDRQLAPGVFKITYGSEFNEEFFEDG 788
            :::  || .|:::.   ::.:...:......|..|.::..:..|..|:..:|:.|...|.||::.
  Rat   873 LKADKLYLQGLLQY---YDDLCQEVPSVFVNLMTPKMKKVESVLRQGLTVLTWSSLMLESFFKEV 934

  Fly   789 TEFIAEFQELVLIFKRANRGVARICE--------KICGTCLLHFAFSGSVDISVFQQQLSSRLSS 845
            ...:..|.:|:   |:.|    .:||        :|..|.|:..:.||:..:........:....
  Rat   935 ESVLDMFNQLL---KKVN----DLCEMHIDTVLKEIAKTLLISLSDSGATRVEDMLTLNETYTKE 992

  Fly   846 SGDILRSYYSHVVELLS------------AFSGQ-------------FQSVDDEMSAEWIAY--- 882
            ..|||.....||.|.:.            .::|:             |.|..||  .|.:.|   
  Rat   993 WADILNHKSRHVEEAVKELILIFEQIYEVKYTGKPAKPVPEQRKHVVFGSEADE--GESLEYDPD 1055

  Fly   883 -------VNDMDD---------------MLASSLMTSARGSLNKLYEALHC-------DADMASA 918
                   .||.:|               .|..||..:.|.||:.:.:.:..       ..|:.| 
  Rat  1056 STARDVDNNDKEDEFKKECKEVYAFFSHQLLDSLQKATRLSLDTMKKRIFVGNQGRKRSEDVVS- 1119

  Fly   919 PIIVVESDVKDGRIVFTPDMDAIGDMINGIVD-------------------------SIRSMLDQ 958
             .|..|..:....:|..|.:|.|...||.::.                         |.|.. ||
  Rat  1120 -FIKTEVHLAIPNVVMVPSLDDIQQAINRMIQLTLEVSRGVAHWGQQQVRRTKSPQTSSRGS-DQ 1182

  Fly   959 FPRLGYKLK---------LPKKQQRQGFASVFREDQECSELMRSIQAEIGIQREELAKYESEWNK 1014
            ...:|..||         :|.::.:..:..| .|.::.|:|:..:.:.:...|:...:...::.|
  Rat  1183 PSIMGKALKKEERSFEESIPARKLKNFYPGV-AEHKDISKLVLLLSSSVNSLRKAATEALQDFQK 1246

  Fly  1015 NRVLWQTTEEEFRQRLMSKSRTAGVFEGGIEHYSALADDVIFEDAITNVYFILINQNALKSTMLD 1079
            .:.||....:...:..::.:.:.......|.||:....::.....|.:|..:.::...:|..:..
  Rat  1247 YKTLWTEDRDVKVKEFLANNPSLTEIRSEILHYATFEQEIEELKPIIDVGALELHTEPMKLALSI 1311

  Fly  1080 WIEKWQALNIKMLLDHGSNLMGAVYRYMRRNERNVMKVPRTIRETVAAKQLFEKL--LKDVPVKQ 1142
            ..:.|:.|..:.|.:.....|..:..::  || .:.|:.|.||:....:...|.|  ::|..::.
  Rat  1312 EAKAWKMLLCRYLNEEYKKKMSDMIVFI--NE-YLKKLSRPIRDLDDVRFAMEALSCIRDNEIQM 1373

  Fly  1143 S-AFTPMLELFVLLHKYQVKLSEETFEQVMGLETAWLHYLQVLEEADEMLDNEDSEAKLLLAKHG 1206
            . ...|:.|.:.:|::::|::::|..|   |::|....:.::..:|..:.|.        |.:..
  Rat  1374 DMTLGPIEEAYGILNRFEVEVTKEESE---GVDTLRYSFNKLQSKAVSVQDE--------LVQVQ 1427

  Fly  1207 EKFKLILKDFLEDF 1220
            .|||..|.:.::.|
  Rat  1428 PKFKSSLLESVDVF 1441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9068NP_611111.1 DHC_N1 212..784 CDD:462457 125/620 (20%)
Dnah8NP_001414021.1 None

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