DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and MSC

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_005089.2 Gene:MSC / 9242 HGNCID:7321 Length:206 Species:Homo sapiens


Alignment Length:171 Identity:54/171 - (31%)
Similarity:69/171 - (40%) Gaps:54/171 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SSASEEDGSSQ-------YLGSPNYNLTQLPPVSGQDYGQGAFLSPEWQFLDAAGGTQTELGPIM 63
            |||.|||...:       ..||......:.|.|:|   |.|            |||:        
Human    45 SSAEEEDPDGEEERCALGTAGSAEGCKRKRPRVAG---GGG------------AGGS-------- 86

  Fly    64 EAQGQHTQPQTKRRSNSFTGSDGRKSSPEQTNLSPTVQKRRRQAANARERKRMNGLNAAFERLRE 128
                              .|..|:|..|.:.:.:...|. :|.|||||||.||..|:.||.||:.
Human    87 ------------------AGGGGKKPLPAKGSAAECKQS-QRNAANARERARMRVLSKAFSRLKT 132

  Fly   129 VVPAPSIDQKLSKFETLQMAQSYILALCDLL-----NNGDV 164
            .:|....|.||||.:||::|.|||..|..||     .||.|
Human   133 SLPWVPPDTKLSKLDTLRLASSYIAHLRQLLQEDRYENGYV 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 28/54 (52%)
MSCNP_005089.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..115 25/111 (23%)
Nuclear localization signal. /evidence=ECO:0000255 71..76 0/4 (0%)
bHLH_TS_musculin 105..170 CDD:381546 31/65 (48%)

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