DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and neurod6

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_001072273.1 Gene:neurod6 / 779726 XenbaseID:XB-GENE-969227 Length:337 Species:Xenopus tropicalis


Alignment Length:106 Identity:41/106 - (38%)
Similarity:61/106 - (57%) Gaps:5/106 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 IMEAQGQHTQPQTKRRSNSFTGSDG--RKSSPEQTNLSPTVQKR---RRQAANARERKRMNGLNA 121
            |..:..:.|:.:.:.........:|  |:..|.:..::....:|   ||..||||||.||:|||.
 Frog    48 IKRSPEEETEQEEEDEDREEEDENGLPRRRGPRKKKMTKVRIERIKVRRVEANARERGRMHGLND 112

  Fly   122 AFERLREVVPAPSIDQKLSKFETLQMAQSYILALCDLLNNG 162
            |.:.||:|||..|..|||||.|||::|::||.||.::|..|
 Frog   113 ALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRIG 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 33/54 (61%)
neurod6NP_001072273.1 bHLH_TS_NeuroD4_ATOH3 74..151 CDD:381564 36/76 (47%)
Neuro_bHLH 153..272 CDD:463621 1/1 (100%)

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