DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cato and Tal2

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_001102932.1 Gene:Tal2 / 685229 RGDID:1596467 Length:108 Species:Rattus norvegicus


Alignment Length:74 Identity:29/74 - (39%)
Similarity:42/74 - (56%) Gaps:2/74 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 RRQAANARERKRMNGLNAAFERLREVVPAPSIDQKLSKFETLQMAQSYILALCDLLNNGDVEVD- 167
            |:...|.|||.|...:|:||.:||:::|....|:||||.|||::|..||..|..:|....::.. 
  Rat     3 RKIFTNTRERWRQQSVNSAFAKLRKLIPTHPPDKKLSKNETLRLAMRYINFLVKVLGEQSLQQTG 67

  Fly   168 -AAAYTIFG 175
             ||...|.|
  Rat    68 IAAQGNILG 76

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 24/54 (44%)
Tal2NP_001102932.1 bHLH_TS_TAL2 2..62 CDD:381550 25/58 (43%)

Return to query results.
Submit another query.