DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cato and NEUROD6

DIOPT Version :9

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_073565.2 Gene:NEUROD6 / 63974 HGNCID:13804 Length:337 Species:Homo sapiens


Alignment Length:108 Identity:45/108 - (41%)
Similarity:60/108 - (55%) Gaps:9/108 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 IMEAQGQHTQPQTKRRSNSFTGSDG-------RKSSPEQTNLSPTVQKRRRQAANARERKRMNGL 119
            |..|.|:.|:.:.:.........:|       ||....:..|...  |.|||.||||||.||:||
Human    48 IKRAPGEETEKEEEEEDREEEDENGLPRRRGLRKKKTTKLRLERV--KFRRQEANARERNRMHGL 110

  Fly   120 NAAFERLREVVPAPSIDQKLSKFETLQMAQSYILALCDLLNNG 162
            |.|.:.||:|||..|..|||||.|||::|::||.||.::|..|
Human   111 NDALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRIG 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 HLH 104..155 CDD:278439 32/50 (64%)
NEUROD6NP_073565.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..82 6/33 (18%)
Nuclear localization signal. /evidence=ECO:0000255 80..86 2/5 (40%)
bHLH_TS_NeuroD6_ATOH2 82..151 CDD:381565 36/70 (51%)
Neuro_bHLH 153..272 CDD:403655 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2611
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

Return to query results.
Submit another query.