DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and Hand1

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_067603.1 Gene:Hand1 / 59112 RGDID:621206 Length:216 Species:Rattus norvegicus


Alignment Length:135 Identity:48/135 - (35%)
Similarity:62/135 - (45%) Gaps:20/135 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 YGQGAFLSPEWQFLDAAGGTQTELGPIMEAQGQHTQPQTKRRSNSFTGSDGRKS-SPEQTNLSPT 99
            |.|...|||    .|||        |...|.|   .|.|...:.:..|.|.|.| ||.:......
  Rat    41 YFQSWLLSP----ADAA--------PDFPAGG---PPPTTAVAAAAYGPDARPSQSPGRLEALGG 90

  Fly   100 VQKRRRQAANARERKRMNGLNAAFERLREVVPAPSIDQKLSKFETLQMAQSYILALCDLL----N 160
            ...||:.:...:||:|...:|:||..|||.:|....|.||||.:||::|.|||..|.|:|    .
  Rat    91 RLPRRKGSGPKKERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVLAKDAQ 155

  Fly   161 NGDVE 165
            .||.|
  Rat   156 AGDPE 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 24/54 (44%)
Hand1NP_067603.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..109 11/35 (31%)
bHLH_TS_HAND1 94..153 CDD:381522 26/58 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 165..203
Blue background indicates that the domain is not in the aligned region.

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