DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and olig3

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_001103863.1 Gene:olig3 / 566728 ZFINID:ZDB-GENE-080903-1 Length:255 Species:Danio rerio


Alignment Length:138 Identity:48/138 - (34%)
Similarity:70/138 - (50%) Gaps:25/138 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 LDAAGGTQTELGPIMEAQGQHTQPQTKRRSNSFTGSDG--RKSSPEQTNLSPTVQKRRRQAANAR 111
            |::...||.||  :.:...:|.       |.:.:||..  :|...||     .:|:.|.: .|.|
Zfish    33 LNSVSSTQNEL--LQKMASEHL-------SKTPSGSKYKLKKQVTEQ-----EIQQLRLK-INGR 82

  Fly   112 ERKRMNGLNAAFERLREVVP---APSIDQKLSKFETLQMAQSYILALCDLLNNGDVEVDAAAYTI 173
            |||||:.||.|.:.||||:|   .||: :||||..||.:|::|||.|...|:    |:......|
Zfish    83 ERKRMHDLNLAMDGLREVMPYAHGPSV-RKLSKIATLLLARNYILMLTSSLD----EMKRLVGEI 142

  Fly   174 FGDSDSGF 181
            :|...|.|
Zfish   143 YGGHHSAF 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 29/57 (51%)
olig3NP_001103863.1 bHLH_TS_OLIG3 60..140 CDD:381511 35/90 (39%)

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