DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and tcf21

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:XP_073794575.1 Gene:tcf21 / 558148 ZFINID:ZDB-GENE-051113-88 Length:210 Species:Danio rerio


Alignment Length:87 Identity:36/87 - (41%)
Similarity:53/87 - (60%) Gaps:6/87 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 KRRSNSFTGSDGRKSSPEQTNLSPTVQKRRRQAANARERKRMNGLNAAFERLREVVPAPSIDQKL 139
            |||.:    ::.|:|:|  ..::...::.:|.|||||||.||..|:.||.||:..:|....|.||
Zfish    88 KRRKS----ANMRRSAP--NGVAQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWVPPDTKL 146

  Fly   140 SKFETLQMAQSYILALCDLLNN 161
            ||.:||::|.|||..|..:|.|
Zfish   147 SKLDTLRLASSYIAHLRQILAN 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 28/54 (52%)
tcf21XP_073794575.1 None

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