DRSC/TRiP Functional Genomics Resources

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Protein Alignment cato and twist1b

DIOPT Version :10

Sequence 1:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_001017820.1 Gene:twist1b / 550518 ZFINID:ZDB-GENE-050417-357 Length:169 Species:Danio rerio


Alignment Length:146 Identity:47/146 - (32%)
Similarity:72/146 - (49%) Gaps:25/146 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 PEWQFLDAAGGTQTELGPIMEAQGQHTQP----QTKRRSNSFTGSD---------GRKSSPEQTN 95
            ||....|::....:....:..:.|:..:|    ..||||:...|.|         |:|||    |
Zfish     2 PEEPARDSSSSPVSPADSLSNSDGEPDRPPKRCARKRRSSKKNGEDSDSSTLGKRGKKSS----N 62

  Fly    96 LSPTVQ-----KRRRQAANARERKRMNGLNAAFERLREVVPA-PSIDQKLSKFETLQMAQSYILA 154
            .|.:.|     :.:|..||.|||:|...||.||..||:::|. ||  .||||.:||::|..||..
Zfish    63 SSNSPQSFEELQTQRVMANVRERQRTQSLNEAFAALRKIIPTLPS--DKLSKIQTLKLAARYIDF 125

  Fly   155 LCDLLNNGDVEVDAAA 170
            ||.:|.:.:::...|:
Zfish   126 LCQVLQSDELDSKMAS 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 27/55 (49%)
twist1bNP_001017820.1 bHLH_TS_TWIST1 65..141 CDD:381418 29/77 (38%)

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